RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	THAP3	Q8WTV1	239 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	MTFMT	Q96DP5	389 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	VMP1	Q96GC9	406 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PSMG3-AS1	Q96PY0	264 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMEM237	Q96Q45	408 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	DEFB126	Q9BYW3	111 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPF2	Q9H7B2	306 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	DDX31	Q9H8H2	851 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ANKZF1	Q9H8Y5	726 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	KLHL1	Q9NR64	748 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PSD3	Q9NYI0	1048 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	VTI1B	Q9UEU0	232 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TBK1	Q9UHD2	729 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PHF11	Q9UIL8	331 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF225	Q9UK10	706 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PCDHGB6	Q9Y5F9	930 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	CLCA3P	Q9Y6N3	262 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	SPACA6	W5XKT8	324 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	POLE	Q07864	2286 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362		A0A1W2PR48	441 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	TMEM200C	A6NKL6	621 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	FOXO6	A8MYZ6	492 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SLC25A12	O75746	678 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	WISP2	O76076	250 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SEMA3D	O95025	777 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	DDAH2	O95865	285 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	OTC	P00480	354 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	HLCS	P50747	726 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	KCNK10	P57789	538 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	HERVK_113	P63132	956 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	FOLH1	Q04609	750 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	IFT88	Q13099	833 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SERTAD2	Q14140	314 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	UNC50	Q53HI1	259 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZNF678	Q5SXM1	525 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	C18orf63	Q68DL7	685 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	MILR1	Q7Z6M3	343 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	OR4N5	Q8IXE1	308 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZNF321P	Q8N8H1	164 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	OR14A16	Q8NHC5	309 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SSC4D	Q8WTU2	575 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	C5orf34	Q96MH7	638 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SERPINI1	Q99574	410 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	CCDC77	Q9BR77	488 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	ERVK-6	Q9BXR3	956 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	FARSB	Q9NSD9	589 aa	Known RBP	10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	LYAR	Q9NX58	379 aa	Known RBP	10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	MS4A12	Q9NXJ0	267 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	LRFN1	Q9P244	771 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	EMCN	Q9ULC0	261 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	ASB4	Q9Y574	426 aa		10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362	SPTAN1	Q13813	2472 aa	Known RBP	10.95	□□□□□ -0.66
PSMC3-205	ENST00000528362		A0A1W2PPM1	405 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	ASPDH	A6ND91	283 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	WASHC1	A8K0Z3	465 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	C17orf105	B2RV13	164 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	CDK2AP1	O14519	115 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	FCHO1	O14526	889 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	PROM1	O43490	865 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	ITGA10	O75578	1167 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	ZFAND5	O76080	213 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	AIFM1	O95831	613 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	CRYAB	P02511	175 aa	Known RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	GBA	P04062	536 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SP1	P08047	785 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	GSTA1	P08263	222 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	FAM58BP	P0C7Q3	252 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	NR2F6	P10588	404 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	CD46	P15529	392 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TAC1	P20366	129 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	ATP5F1	P24539	256 aa	Predicted RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TLX1	P31314	330 aa	Predicted RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	HSD17B3	P37058	310 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SLCO1A2	P46721	670 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	STT3A	P46977	705 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	CYB561	P49447	251 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	PRKAA2	P54646	552 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	CLC	Q05315	142 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SGO1	Q5FBB7	561 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	C10orf62	Q5T681	223 aa	Predicted RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TTC19	Q6DKK2	380 aa	Predicted RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SLC25A25	Q6KCM7	469 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SH2D5	Q6ZV89	423 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	GALNTL5	Q7Z4T8	443 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	NUDT13	Q86X67	352 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TDRP	Q86YL5	185 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	HORMAD2	Q8N7B1	307 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TMEM178A	Q8NBL3	297 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	MORN4	Q8NDC4	146 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	DNAJB8	Q8NHS0	232 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SLC2A12	Q8TD20	617 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	TRPC4AP	Q8TEL6	797 aa		10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	SREK1	Q8WXA9	508 aa	Known RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	DAZL	Q92904	295 aa	Known RBP	10.94	□□□□□ -0.66
PSMC3-205	ENST00000528362	FRMD6	Q96NE9	622 aa		10.94	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms