RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 PDYNP01213 254 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TNFP01375 233 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 BCHEP06276 602 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PFKLP17858 780 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RPS5P46782 204 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CREB5Q02930 508 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 OR4D1Q15615 310 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CLLU1OSQ5K130 101 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RTP2Q5QGT7 225 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 UBAP2Q5T6F2 1119 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TMIGD1Q6UXZ0 262 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RANBP10Q6VN20 620 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SMIM15Q7Z3B0 74 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TP53INP2Q8IXH6 220 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ANKFN1Q8N957 763 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 AVL9Q8NBF6 648 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SNX33Q8WV41 574 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GATA6Q92908 595 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SMG9Q9H0W8 520 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 DPEP2Q9H4A9 486 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 REEP4Q9H6H4 257 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 HCN2Q9UL51 889 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PRAMEF12O95522 483 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 UQCRC2P22695 453 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GKP32189 559 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 DIO3P55073 304 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TAS2R50P59544 299 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 AKR1C8PQ5T2L2 129 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 AGAP7PQ5VUJ5 663 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SSX6Q7RTT6 188 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 KDM1BQ8NB78 822 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 BEST4Q8NFU0 473 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 THRSPQ92748 146 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RAB7BQ96AH8 199 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 MOAP1Q96BY2 351 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SAMD11Q96NU1 681 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 KCNS3Q9BQ31 491 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLC2A11Q9BYW1 496 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PCDHGB1Q9Y5G3 927 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TPST2O60704 377 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PLATP00750 562 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TRAPPC2P0DI81 140 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TRAPPC2BP0DI82 140 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PRKCAP17252 672 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 IL12BP29460 328 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ACTR1BP42025 376 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ACTR1AP61163 376 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLC13A2Q13183 592 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 PTGR1Q14914 329 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TAZQ16635 292 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 Q6ZNX1 250 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF283Q8N7M2 679 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CHST4Q8NCG5 386 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 GPR151Q8TDV0 419 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 METTL21AQ8WXB1 218 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SGTBQ96EQ0 304 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 DHRS9Q9BPW9 319 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 UCK2Q9BZX2 261 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TP63Q9H3D4 680 aaPredicted RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 CREBZFQ9NS37 354 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 DZANK1Q9NVP4 752 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 TMEM45AQ9NWC5 275 aa6.94□□□□□ -1.3
CTNND1-218ENST00000528232 LYARQ9NX58 379 aaKnown RBP6.94□□□□□ -1.3
CTNND1-218ENST00000528232 EFCAB7A8K855 629 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 TOR1BO14657 336 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 C6orf47O95873 294 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 CDK4P11802 303 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 GMPRP36959 345 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 ARSDP51689 593 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 CASP9P55211 416 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 RAB30Q15771 203 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 KCNJ8Q15842 424 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 CYBRD1Q53TN4 286 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 LRIF1Q5T3J3 769 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 NOXRED1Q6NXP6 359 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 ZCCHC12Q6PEW1 402 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 KDELC1Q6UW63 502 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 SCD5Q86SK9 330 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 ZNF598Q86UK7 904 aaKnown RBP6.93□□□□□ -1.3
CTNND1-218ENST00000528232 LRRTM3Q86VH5 581 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 GRAMD2AQ8IUY3 354 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 KLHL36Q8N4N3 616 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 ACBD4Q8NC06 268 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 TUBB1Q9H4B7 451 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 COPS7AQ9UBW8 275 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 NDRG2Q9UN36 371 aaKnown RBP6.93□□□□□ -1.3
CTNND1-218ENST00000528232 RNF6Q9Y252 685 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 EIF3FO00303 357 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-218ENST00000528232 TO15178 435 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 HLA-EP13747 358 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 JUPP14923 745 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 HMGCLP35914 325 aa6.93□□□□□ -1.3
CTNND1-218ENST00000528232 RAB39AQ14964 217 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms