RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SUPT3HB4E1H0 165 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 PEX1O43933 1283 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 UGDHO60701 494 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 SUPT3HO75486 399 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 FAM155BO75949 473 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ABHD2P08910 425 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ABOP16442 354 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 CERS1P27544 350 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 PTGER4P35408 488 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 PIK3CGP48736 1102 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 HNRNPFP52597 415 aaKnown RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 DLG1Q12959 904 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 FBXO48Q5FWF7 155 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 GRHL2Q6ISB3 625 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 KLC3Q6P597 504 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 RGS9BPQ6ZS82 235 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 UBE3DQ7Z6J8 389 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 SULF2Q8IWU5 870 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 CPSF7Q8N684 471 aaKnown RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ZFP62Q8NB50 900 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 TMEM52Q8NDY8 209 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 PHF10Q8WUB8 498 aaKnown RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 REPS1Q96D71 796 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ROPN1BQ9BZX4 212 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ROPN1Q9HAT0 212 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 MYOTQ9UBF9 498 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF223Q9UK11 482 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 MEMO1Q9Y316 297 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ANGPTL3Q9Y5C1 460 aa13.21□□□□□ -0.29
CAPN1-212ENST00000527887 TNPO3Q9Y5L0 923 aaKnown RBP13.21□□□□□ -0.29
CAPN1-212ENST00000527887 ABCA12Q86UK0 2595 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 A8MVJ9 347 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 E9PLN8 166 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 TGFBR3LH3BV60 316 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 UBXN8O00124 270 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 DYRK3O43781 588 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 WISP2O76076 250 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 KLHL2O95198 593 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 C2P06681 752 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PCNAP12004 261 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 MTHFD2P13995 350 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 COX7A2P14406 83 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 TNNI3P19429 210 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PTX3P26022 381 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 HTR1EP28566 365 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PPP2R1BP30154 601 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 MEOX1P50221 254 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ST13P50502 369 aaKnown RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PHEXP78562 749 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 UAP1Q16222 522 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 KHDRBS2Q5VWX1 349 aaKnown RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 OR4C11Q6IEV9 310 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ADNP2Q6IQ32 1131 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PAOXQ6QHF9 649 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 GOLGA6L1Q8N7Z2 621 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 TANKQ92844 425 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 EXT2Q93063 718 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 RGMAQ96B86 450 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 NXNL1Q96CM4 212 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 CSF3RQ99062 836 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 SH3GL2Q99962 352 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 VKORC1Q9BQB6 163 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 HPF1Q9NWY4 346 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 TINAGQ9UJW2 476 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ERVK-11Q9UQG0 969 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 ASB1Q9Y576 335 aa13.2□□□□□ -0.3
CAPN1-212ENST00000527887 APCP25054 2843 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 ARHGAP10A1A4S6 786 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TMEM200CA6NKL6 621 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 H0YIV9 168 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TFECO14948 347 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 RIPK2O43353 540 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 KLK8O60259 260 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TGFB1P01137 390 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 GFAPP14136 432 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 CPN2P22792 545 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TLX1P31314 330 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 SSR2P43308 183 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 ADORA2A-AS1P86434 159 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 HSP90B2PQ58FF3 399 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 ZNF793Q6ZN11 406 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 CLNKQ7Z7G1 428 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 DOLPP1Q86YN1 238 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 CENPLQ8N0S6 344 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 ZCCHC7Q8N3Z6 543 aaKnown RBP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TEX9Q8N6V9 391 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 ART5Q96L15 291 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 TSPAN10Q9H1Z9 355 aaPredicted RBP13.19□□□□□ -0.3
CAPN1-212ENST00000527887 SNX15Q9NRS6 342 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms