RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 ZNF721Q8TF20 911 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 KIAA1191Q96A73 305 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ESAMQ96AP7 390 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 WDR34Q96EX3 536 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 MAPKAP1Q9BPZ7 522 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 CNPPD1Q9BV87 410 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 LYRM4Q9HD34 91 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 DNAJB12Q9NXW2 375 aaKnown RBP21.78■■□□□ 1.08
CPSF1-202ENST00000527827 MOCS1Q9NZB8 636 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ACAD8Q9UKU7 415 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 SNX12Q9UMY4 172 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ATG4BQ9Y4P1 393 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ACANP16112 2415 aa21.78■■□□□ 1.08
CPSF1-202ENST00000527827 ABCA4P78363 2273 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 CES2O00748 559 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 WDR1O75083 606 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 CTAG2O75638 210 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 P04436 131 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 ENDOUP21128 410 aaKnown RBP21.77■■□□□ 1.08
CPSF1-202ENST00000527827 ID2Q02363 134 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 SERTAD2Q14140 314 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 SLC10A1Q14973 349 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 C1orf185Q5T7R7 199 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 ADGRD1Q6QNK2 874 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 MYRIPQ8NFW9 859 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 ANKRD9Q96BM1 317 aaPredicted RBP21.77■■□□□ 1.08
CPSF1-202ENST00000527827 PTCD3Q96EY7 689 aaKnown RBP21.77■■□□□ 1.08
CPSF1-202ENST00000527827 VPS39Q96JC1 886 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 FOXC2Q99958 501 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 DERL2Q9GZP9 239 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 LDAHQ9H6V9 325 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 POPDC3Q9HBV1 291 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 WWOXQ9NZC7 414 aa21.77■■□□□ 1.08
CPSF1-202ENST00000527827 ANKHD1Q8IWZ3 2542 aaKnown RBP21.76■■□□□ 1.07
CPSF1-202ENST00000527827 FAM221AA4D161 298 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 CLGNO14967 610 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 KCNC1P48547 511 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 HSPA7P48741 367 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 TGM3Q08188 693 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 FASTKD3Q14CZ7 662 aaKnown RBP21.76■■□□□ 1.07
CPSF1-202ENST00000527827 MPEG1Q2M385 716 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 SLC25A35Q3KQZ1 300 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 PIGGQ5H8A4 983 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 TCAIMQ8N3R3 496 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 SPATA6LQ8N4H0 392 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 NINJ1Q92982 152 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 SARAFQ96BY9 339 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 KCNC2Q96PR1 638 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 RHOJQ9H4E5 214 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 SH2D2AQ9NP31 389 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 CCM2LQ9NUG4 571 aaPredicted RBP21.76■■□□□ 1.07
CPSF1-202ENST00000527827 ZNF358Q9NW07 568 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 SPRR3Q9UBC9 169 aa21.76■■□□□ 1.07
CPSF1-202ENST00000527827 NIPBLQ6KC79 2804 aaeCLIP21.76■■□□□ 1.075e-8■□□□□ 8.3
CPSF1-202ENST00000527827 TP73O15350 636 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 HCN1O60741 890 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 FREM3P0C091 2139 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 EPORP19235 508 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ATP5A1P25705 553 aaKnown RBP21.75■■□□□ 1.07
CPSF1-202ENST00000527827 PIGAP37287 484 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ARL4CP56559 192 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 FOLH1Q04609 750 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ASPHQ12797 758 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 SNTB1Q13884 538 aaKnown RBP21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ZNF791Q3KP31 576 aaPredicted RBP21.75■■□□□ 1.07
CPSF1-202ENST00000527827 WLSQ5T9L3 541 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ARSKQ6UWY0 536 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 TGIF2LYQ8IUE0 185 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ZZZ3Q8IYH5 903 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ACOT4Q8N9L9 421 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 SNX31Q8N9S9 440 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 FBXO36Q8NEA4 188 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 EFCAB11Q9BUY7 163 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 ROGDIQ9GZN7 287 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 LIME1Q9H400 295 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.75■■□□□ 1.07
CPSF1-202ENST00000527827 NINQ8N4C6 2090 aa21.75■■□□□ 1.07
CPSF1-202ENST00000527827 TRGV5A0A0B4J1U4 118 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 RTCAO00442 366 aaKnown RBP21.74■■□□□ 1.07
CPSF1-202ENST00000527827 STK16O75716 305 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 CDKL4Q5MAI5 379 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 RIPPLY2Q5TAB7 128 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 LYPD8Q6UX82 237 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 GPSM1Q86YR5 675 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 C9orf40Q8IXQ3 194 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 NUBPLQ8TB37 319 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 RUNDC3BQ96NL0 473 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 TBCDQ9BTW9 1192 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 MS4A8Q9BY19 250 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 POLDIP3Q9BY77 421 aaKnown RBP21.74■■□□□ 1.07
CPSF1-202ENST00000527827 CNOT10Q9H9A5 744 aaKnown RBP21.74■■□□□ 1.07
CPSF1-202ENST00000527827 SMYD2Q9NRG4 433 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 ALKBH4Q9NXW9 302 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 COPS7AQ9UBW8 275 aa21.74■■□□□ 1.07
CPSF1-202ENST00000527827 HRNRQ86YZ3 2850 aaPredicted RBP21.74■■□□□ 1.07
CPSF1-202ENST00000527827 PIAS1O75925 651 aa21.73■■□□□ 1.07
CPSF1-202ENST00000527827 RFPL3SP0C7P2 107 aa21.73■■□□□ 1.07
CPSF1-202ENST00000527827 IGLV3-21P80748 117 aaPredicted RBP21.73■■□□□ 1.07
CPSF1-202ENST00000527827 PDIA2Q13087 525 aaKnown RBP21.73■■□□□ 1.07
CPSF1-202ENST00000527827 OR4D1Q15615 310 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms