RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 WDR37Q9Y2I8 494 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 A0A1W2PP55 124 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 CLCA1A8K7I4 914 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 J3KTA2 159 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 M0R3G1 203 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 RECKO95980 971 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 VIPP01282 170 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ACP5P13686 325 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 PKLRP30613 574 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ARFIP1P53367 373 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 DUSP7Q16829 419 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ZNF776Q68DI1 518 aaPredicted RBP14.58□□□□□ -0.08
USH1C-207ENST00000527720 C16orf87Q6PH81 154 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 UBE3DQ7Z6J8 389 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 DNAJC22Q8N4W6 341 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 CREB3L4Q8TEY5 395 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 NRTNQ99748 197 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 C1QTNF2Q9BXJ5 285 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 PLA2G2FQ9BZM2 168 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 SERGEFQ9UGK8 458 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 LAMA3Q16787 3333 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 A0A0A6YYD5 115 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 PRR19A6NJB7 356 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 PCDH17O14917 1159 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 MPZL2O60487 215 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 PAK4O96013 591 aaPredicted RBP14.58□□□□□ -0.08
USH1C-207ENST00000527720 BCHEP06276 602 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 GABRB1P18505 474 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 NR4A1P22736 598 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 GRK3P35626 688 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 SERPINB10P48595 397 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 SGCGQ13326 291 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 FGL2Q14314 439 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 DGUOKQ16854 277 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ADPRMQ3LIE5 342 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 SPDYE7PQ495Y7 208 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 C2orf27AQ580R0 203 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 COLEC12Q5KU26 742 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 Q6ZPB1 254 aaPredicted RBP14.58□□□□□ -0.08
USH1C-207ENST00000527720 SLC15A4Q8N697 577 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ZNF513Q8N8E2 541 aaPredicted RBP14.58□□□□□ -0.08
USH1C-207ENST00000527720 OR2A1Q8NGT9 310 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 S100ZQ8WXG8 99 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 TMEM19Q96HH6 336 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 ABCG4Q9H172 646 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 OSGEPL1Q9H4B0 414 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 MVB12BQ9H7P6 319 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 FAIMQ9NVQ4 179 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 SLC17A4Q9Y2C5 497 aa14.58□□□□□ -0.08
USH1C-207ENST00000527720 TMEM247A6NEH6 219 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 LCMT2O60294 686 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 MAN1A2O60476 641 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 MFN2O95140 757 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 CDK1P06493 297 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 WASP42768 502 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 MLLT10P55197 1068 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ABATP80404 500 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 HSPB3Q12988 150 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 PUM1Q14671 1186 aaKnown RBP eCLIP14.57□□□□□ -0.08
USH1C-207ENST00000527720 ZNF846Q147U1 533 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ITPRIPL2Q3MIP1 535 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ANKDD1AQ495B1 522 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 TNFAIP8L2Q6P589 184 aaPredicted RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 SLCO6A1Q86UG4 719 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 CACUL1Q86Y37 369 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 OR9Q2Q8NGE9 314 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 PROX1Q92786 737 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 FAM131CQ96AQ9 280 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 EXOSC8Q96B26 276 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 ELSPBP1Q96BH3 223 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ALPK1Q96QP1 1244 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ZNF607Q96SK3 696 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 FAIM2Q9BWQ8 316 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 C1QTNF7Q9BXJ2 289 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 BTBD1Q9H0C5 482 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ZNF226Q9NYT6 803 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 DGKBQ9Y6T7 804 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 MDC1Q14676 2089 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 TRANK1O15050 2925 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 SNRNP200O75643 2136 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 LRIT2A6NDA9 550 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 HMGN4O00479 90 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ZBTB11O95625 1053 aaPredicted RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 OXSR1O95747 527 aaPredicted RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 FUCA1P04066 466 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 TNFRSF4P43489 277 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 CCT3P49368 545 aaKnown RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 CDC42P60953 191 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 DGCR6Q14129 220 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 ZIC1Q15915 447 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 CYP27C1Q4G0S4 372 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 FAM109BQ6ICB4 259 aaPredicted RBP14.57□□□□□ -0.08
USH1C-207ENST00000527720 FAM180BQ6P0A1 224 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 CCDC103Q8IW40 242 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 TAGAPQ8N103 731 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 GGHQ92820 318 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 SLC38A4Q969I6 547 aa14.57□□□□□ -0.08
USH1C-207ENST00000527720 SH3YL1Q96HL8 342 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms