RNA–Protein interactions for RNA: ENST00000527495.5

CCDC90B-209, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-209ENST00000527495 LINGO3P0C6S8 592 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CALM1P0DP23 149 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CALM2P0DP24 149 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CALM3P0DP25 149 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 IL7RP16871 459 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CTRB1P17538 263 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 POLR2EP19388 210 aaKnown RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CD72P21854 359 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CCNOP22674 350 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 DGKAP23743 735 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PRPH2P23942 346 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PIK3R1P27986 724 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 HLA-FP30511 346 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ALDH3A1P30838 453 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TIA1P31483 386 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 FDFT1P37268 417 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 GRIA1P42261 906 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 MAGEB1P43366 347 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PCYT1AP49585 367 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CSNK1EP49674 416 aaKnown RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 MVDP53602 400 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CDH6P55285 790 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 HNRNPKP61978 463 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CBX1P83916 185 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 EGR4Q05215 589 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ACSM2AQ08AH3 577 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 SMARCB1Q12824 385 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 DRAP1Q14919 205 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TGFBIQ15582 683 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ALX1Q15699 326 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 MAPK6Q16659 721 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 UGCGQ16739 394 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CDO1Q16878 200 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 VWC2Q2TAL6 325 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ALKBH6Q3KRA9 238 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 C6orf183Q5T699 404 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PRAMEF7Q5VXH5 474 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ACSM2BQ68CK6 577 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 SEL1L3Q68CR1 1132 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CTRB2Q6GPI1 263 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 METTL2BQ6P1Q9 378 aaKnown RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TTC33Q6PID6 262 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 Q6ZTC4 211 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 Q6ZTK2 550 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 GPRIN3Q6ZVF9 776 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PAQR9Q6ZVX9 377 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 COPS6Q7L5N1 327 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 GPR180Q86V85 440 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TBC1D19Q8N5T2 526 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 BCORP1Q8N888 145 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 OR4K14Q8NGD5 310 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 OR13F1Q8NGS4 319 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 LMO3Q8TAP4 145 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 GRHL3Q8TE85 626 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 NUDCD2Q8WVJ2 157 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 RAB40AQ8WXH6 277 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PIGBQ92521 554 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 RIT1Q92963 219 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 SLCO4A1Q96BD0 722 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TMA16Q96EY4 203 aaKnown RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 C4orf36Q96KX1 117 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 MEIS3Q99687 375 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 NPAS2Q99743 824 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 CIB1Q99828 191 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 SPAG8Q99932 426 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 MXRA8Q9BRK3 442 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TMEM43Q9BTV4 400 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 C1QTNF1Q9BXJ1 281 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 POTEKPQ9BYX7 375 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ZMYND12Q9H0C1 365 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 OPN3Q9H1Y3 402 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 OR51V1Q9H2C8 321 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 COG4Q9H9E3 785 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 HHATLQ9HCP6 504 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 APMAPQ9HDC9 416 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 Q9N2J8 555 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 RRAGDQ9NQL2 400 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 KLHL1Q9NR64 748 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 FAM207AQ9NSI2 230 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ZCCHC3Q9NUD5 404 aaKnown RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 BABAM1Q9NWV8 329 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 RBAKQ9NYW8 714 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 HACD3Q9P035 362 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ONECUT1Q9UBC0 465 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 TBC1D24Q9ULP9 559 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 PSMD13Q9UNM6 376 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 STON1Q9Y6Q2 735 aa3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 SF3B1O75533 1304 aaKnown RBP eCLIP3.39□□□□□ -1.87
CCDC90B-209ENST00000527495 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 LOC390937A0A1W2PQ73 354 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 A0A1W2PR77 199 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 LNP1A1A4G5 178 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 RAB19A4D1S5 217 aa3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 MBD3L5A6NJ08 208 aaPredicted RBP3.38□□□□□ -1.87
CCDC90B-209ENST00000527495 C17orf100A8MU93 164 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms