RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TOX3O15405 576 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 BMP2P12643 396 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 FASP25445 335 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 GABRA4P48169 554 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 ARL4DP49703 201 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 KLC1Q07866 573 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CCDC157Q569K6 752 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF621Q6ZSS3 439 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CALHM3Q86XJ0 350 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 CLECL1Q8IZS7 167 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 GALNT4Q8N4A0 578 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 PAPD5Q8NDF8 572 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 VPS37AQ8NEZ2 397 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 C16orf78Q8WTQ4 265 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 KLHL6Q8WZ60 621 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 FAM120BQ96EK7 910 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 C17orf62Q9BQA9 187 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF717Q9BY31 904 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 VCXQ9H320 206 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF768Q9H5H4 540 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 REEP4Q9H6H4 257 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 STARD5Q9NSY2 213 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 AHSPQ9NZD4 102 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 SH3BP4Q9P0V3 963 aa17.8■□□□□ 0.44
SMPD1-203ENST00000527275 EXO1Q9UQ84 846 aaKnown RBP17.8■□□□□ 0.44
SMPD1-203ENST00000527275 A0A0G2JN53 185 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 EVPLLA8MZ36 301 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 D6RAR5 112 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 TPST1O60507 370 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 KLHL18O94889 574 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SEMA3DO95025 777 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 GZMMP51124 257 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 POLE2P56282 527 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SNRPNP63162 240 aaKnown RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 RGS1Q08116 209 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SPIDRQ14159 915 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 MAP7Q14244 749 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ANXA8L1Q5VT79 327 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ARHGAP22Q7Z5H3 698 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 UBE3DQ7Z6J8 389 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 MICU2Q8IYU8 434 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 D2HGDHQ8N465 521 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 CSNK1A1LQ8N752 337 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ANKFN1Q8N957 763 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 CAMKVQ8NCB2 501 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SEPHS2Q99611 448 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 CDC6Q99741 560 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 CENPKQ9BS16 269 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 COQ10BQ9H8M1 238 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ATP6V1HQ9UI12 483 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ERVK-11Q9UQG0 969 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 CFAP54Q96N23 3096 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 FAM220BPB1ANY3 271 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 C4orf51C9J302 202 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 AGRPO00253 132 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ERI3O43414 337 aaKnown RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SRPX2O60687 465 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ZNF26P17031 533 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 NELFEP18615 380 aaKnown RBP17.79■□□□□ 0.44
SMPD1-203ENST00000527275 RAB8AP61006 207 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 FOLH1Q04609 750 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 C2orf80Q0P641 193 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 ABHD18Q0P651 414 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 TMEM35AQ53FP2 167 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 TOR1AIP1Q5JTV8 583 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 C10orf111Q8N326 155 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 NT5CQ8TCD5 201 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 RGMAQ96B86 450 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 DPYSL5Q9BPU6 564 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 LHX9Q9NQ69 397 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 AGPAT4Q9NRZ5 378 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 BTNL2Q9UIR0 455 aa17.79■□□□□ 0.44
SMPD1-203ENST00000527275 SCN3AQ9NY46 2000 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 CLIC1O00299 241 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 FCGR1AP12314 374 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 EFNA1P20827 205 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-203ENST00000527275 TAS2R50P59544 299 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 STXBP1P61764 594 aaKnown RBP17.78■□□□□ 0.44
SMPD1-203ENST00000527275 NHLH1Q02575 133 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 MED21Q13503 144 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 R3HCC1LQ7Z5L2 792 aaKnown RBP17.78■□□□□ 0.44
SMPD1-203ENST00000527275 KMT5CQ86Y97 462 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 OR2L5Q8NG80 312 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 N4BP2L2Q92802 583 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-203ENST00000527275 CCDC74BQ96LY2 380 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 MYNNQ9NPC7 610 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 PLCL2Q9UPR0 1127 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 V9GYQ6 96 aa17.78■□□□□ 0.44
SMPD1-203ENST00000527275 FAM149AA5PLN7 773 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 EIF4E1BA6NMX2 242 aaKnown RBP17.77■□□□□ 0.44
SMPD1-203ENST00000527275 CXCR6O00574 342 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 SCELO95171 688 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 ANKRD34CP0C6C1 535 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 FOLR1P15328 257 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 BSGP35613 385 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 CLPPQ16740 277 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-203ENST00000527275 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 ABHD17CQ6PCB6 329 aa17.77■□□□□ 0.44
SMPD1-203ENST00000527275 B3GNT8Q7Z7M8 397 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms