RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TMEM5Q9Y2B1 443 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 B4DXG7 233 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 P2RX6O15547 441 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 LYNP07948 512 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 PAX3P23760 479 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ACAT1P24752 427 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 RGS7P49802 495 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 EFNA3P52797 238 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 RPS8P62241 208 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 CD47Q08722 323 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 SLC10A1Q14973 349 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 IL17AQ16552 155 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 SGCBQ16585 318 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ARMC4Q5T2S8 1044 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 TATDN1Q6P1N9 297 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 GPR141Q7Z602 305 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ELMOD1Q8N336 334 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 FBXW8Q8N3Y1 598 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF433Q8N7K0 673 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 OR13C5Q8NGS8 318 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 PHF10Q8WUB8 498 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 SLC35C1Q96A29 364 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF274Q96GC6 653 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 TRIM7Q9C029 511 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 MTIF3Q9H2K0 278 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 TBC1D29Q9UFV1 150 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 ANAPC2Q9UJX6 822 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 CA5BQ9Y2D0 317 aa1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 MAGED1Q9Y5V3 778 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 RAI1Q7Z5J4 1906 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-219ENST00000526299 SLC15A5A6NIM6 579 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 WDHD1O75717 1129 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 GJB5O95377 273 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PDGFBP01127 241 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 FHP07954 510 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 FCGR3AP08637 254 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 LAMP1P11279 417 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 TOP1P11387 765 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PORP16435 677 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ALOX12P18054 663 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PSMB1P20618 241 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 FUT3P21217 361 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 MC5RP33032 325 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PMELP40967 661 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 CLNS1AP54105 237 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 GEMIN4P57678 1058 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ALCAMQ13740 583 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 SNTB1Q13884 538 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ANKRD55Q3KP44 614 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ODF2Q5BJF6 829 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 NHSL2Q5HYW2 709 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PLPP4Q5VZY2 271 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 FAM205BPQ63HN1 556 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 BPIFA2Q96DR5 249 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF558Q96NG5 402 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 KIR2DL4Q99706 377 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 BARD1Q99728 777 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 APOL6Q9BWW8 343 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 TIGARQ9NQ88 270 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF331Q9NQX6 463 aaPredicted RBP1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 MED17Q9NVC6 651 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PRODH2Q9UF12 536 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 PCDHGA1Q9Y5H4 931 aa1.45□□□□□ -2.18
ECHDC1-219ENST00000526299 ITIH6Q6UXX5 1313 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 RNF212BA8MTL3 300 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 EIF5BO60841 1220 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 DUSP11O75319 330 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 CD5P06127 495 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 SBK2P0C263 348 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 CCDC159P0C7I6 412 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 FOSL2P15408 326 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 ERCC2P18074 760 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 DIO3P55073 304 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 MFAP3P55082 362 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 RIPPLY3P57055 190 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 MAPRE1Q15691 268 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 KCTD19Q17RG1 926 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 MICAQ29983 383 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 WDR78Q5VTH9 848 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF730Q6ZMV8 503 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 C4orf50Q6ZRC1 276 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 LINC01555Q8NAE3 123 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 C8orf46Q8TAG6 207 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 GPR148Q8TDV2 347 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 SKA1Q96BD8 255 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 EVI5LQ96CN4 794 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 TREX2Q9BQ50 279 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 TTYH2Q9BSA4 534 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 DPEP3Q9H4B8 488 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 ZNF282Q9UDV7 671 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 KLK4Q9Y5K2 254 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 TRPV2Q9Y5S1 764 aa1.44□□□□□ -2.18
ECHDC1-219ENST00000526299 MYO10Q9HD67 2058 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 IGKV1D-17A0A075B6S4 117 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 ADAM20O43506 726 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 SNAI2O43623 268 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 PSMD10O75832 226 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 SERF1AO75920 110 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 AXLP30530 894 aa1.43□□□□□ -2.18
ECHDC1-219ENST00000526299 CDX1P47902 265 aaPredicted RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms