RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 FRG1Q14331 258 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 CRYMQ14894 314 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ANGPT1Q15389 498 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 CHRNA6Q15825 494 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 WSCD2Q2TBF2 565 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 GPR33Q49SQ1 333 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ZRANB3Q5FWF4 1079 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ARL13AQ5H913 290 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 SPDYCQ5MJ68 293 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 BEND6Q5SZJ8 279 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 LGSNQ5TDP6 509 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 LYPLAL1Q5VWZ2 237 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ALS2CLQ60I27 953 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 STEAP4Q687X5 459 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 PDPK2PQ6A1A2 396 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 RAET1GQ6H3X3 334 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 KIAA0930Q6ICG6 404 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 PNCKQ6P2M8 343 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SLC30A9Q6PML9 568 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 AFTPHQ6ULP2 937 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 FAM151BQ6UXP7 276 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CERS6Q6ZMG9 384 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 LPCAT2Q7L5N7 544 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TAS2R42Q7RTR8 314 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SNX20Q7Z614 316 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 LCA5Q86VQ0 697 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 GALNT13Q8IUC8 556 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TRAM1L1Q8N609 369 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 OR13J1Q8NGT2 312 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 FAM110DQ8TAY7 271 aaPredicted RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 GDAP1Q8TB36 358 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 MGARPQ8TDB4 240 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CDKL2Q92772 493 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SDCCAG3Q96C92 435 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 BIRC7Q96CA5 298 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 NUS1Q96E22 293 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 DTD2Q96FN9 168 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CERS2Q96G23 380 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 BMFQ96LC9 184 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ZSCAN5AQ9BUG6 496 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 HDHD5Q9BXW7 423 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TXLNGYQ9BZA5 131 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A7Q9HAW7 530 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A10Q9HAW8 530 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UGT1A8Q9HAW9 530 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 SPAG4Q9NPE6 437 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 WASH6PQ9NQA3 447 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 MBNL1Q9NR56 388 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 PLSCR4Q9NRQ2 329 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 IARS2Q9NSE4 1012 aaKnown RBP4.32□□□□□ -1.72
USP48-211ENST00000526044 IRAK4Q9NWZ3 460 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 ARL15Q9NXU5 204 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 TBK1Q9UHD2 729 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 CRLS1Q9UJA2 301 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 RCE1Q9Y256 329 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 IKBKGQ9Y6K9 419 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 THADAQ6YHU6 1953 aa4.32□□□□□ -1.72
USP48-211ENST00000526044 UNC80Q8N2C7 3258 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PLXND1Q9Y4D7 1925 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PLXNA2O75051 1894 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 OR51F1A6NGY5 319 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FAM159BA6NKW6 160 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 A6NNC1 897 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 AGAP14A8MT82 685 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 MEI4A8MW99 385 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 B4DGG1 531 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 C10orf142B7Z368 130 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 GAPDHSO14556 408 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 RAD51BO15315 384 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 INPP4BO15327 924 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 LATO43561 262 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FAM155BO75949 473 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KRT38O76015 456 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 NEURL1O76050 574 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CRYABP02511 175 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 PCCBP05166 539 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ABHD2P08910 425 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 HOXC4P09017 264 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 FGF2P09038 288 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PRSS56P0CW18 603 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 RALBP11234 206 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PKMP14618 531 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 CHN1P15882 459 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 H2AFXP16104 143 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 ZNF7P17097 686 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 MSH3P20585 1137 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 BCKDHBP21953 392 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FMO4P31512 558 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 TRIM23P36406 574 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 HSD17B3P37058 310 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 MSH2P43246 934 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 DHPSP49366 369 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 TTPAP49638 278 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PRKAA2P54646 552 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms