RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), human

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-222	ENST00000526025	GNG14	A0A1W2PPG7	69 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	C1orf226	A1L170	272 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	TRPC5OS	A6NMA1	111 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	AIFM1	O95831	613 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	ANXA4	P09525	319 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	PRR35	P0CG20	571 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	HNRNPF	P52597	415 aa	Known RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	RRAD	P55042	308 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	BTG2	P78543	158 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	IGLV3-21	P80748	117 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	SLC13A2	Q13183	592 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	SERTAD2	Q14140	314 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	PDCD2	Q16342	344 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	NDUFAF5	Q5TEU4	345 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	IKBIP	Q70UQ0	350 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	GPR155	Q7Z3F1	870 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	ANKRD37	Q7Z713	158 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	APLF	Q8IW19	511 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	PARP9	Q8IXQ6	854 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	TMEM102	Q8N9M5	508 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	OR11G2	Q8NGC1	345 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	C3orf30	Q96M34	536 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	FER1L6-AS2	Q96M78	137 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	PTCHD1	Q96NR3	888 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	ZNF700	Q9H0M5	742 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	TEX10	Q9NXF1	929 aa	Predicted RBP	19.49	■□□□□ 0.71
CD44-222	ENST00000526025	MAN2B2	Q9Y2E5	1009 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	PCDHA9	Q9Y5H5	950 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	CLDN16	Q9Y5I7	305 aa		19.49	■□□□□ 0.71
CD44-222	ENST00000526025	HP	P00738	406 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	JUN	P05412	331 aa	Known RBP	19.48	■□□□□ 0.71
CD44-222	ENST00000526025	DRD2	P14416	443 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	MAPK1	P28482	360 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	MAD2L1	Q13257	205 aa	Predicted RBP	19.48	■□□□□ 0.71
CD44-222	ENST00000526025	ATP1A4	Q13733	1029 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	TERF2	Q15554	542 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	ATP1A1-AS1	Q5TC04	95 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	C18orf63	Q68DL7	685 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	CPEB2	Q7Z5Q1	589 aa	Known RBP	19.48	■□□□□ 0.71
CD44-222	ENST00000526025	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	19.48	■□□□□ 0.71
CD44-222	ENST00000526025	TSLP	Q969D9	159 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	CCDC134	Q9H6E4	229 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	MYNN	Q9NPC7	610 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	ASIC5	Q9NY37	505 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	EHD3	Q9NZN3	535 aa		19.48	■□□□□ 0.71
CD44-222	ENST00000526025	DOCK10	Q96BY6	2186 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	IGHV1-45	A0A0A0MS14	117 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	COX6A1	P12074	109 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	PCSK2	P16519	638 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	MAOA	P21397	527 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	RPL38	P63173	70 aa	Known RBP	19.47	■□□□□ 0.71
CD44-222	ENST00000526025	HEPACAM	Q14CZ8	416 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	RFTN2	Q52LD8	501 aa	Predicted RBP	19.47	■□□□□ 0.71
CD44-222	ENST00000526025	C6orf136	Q5SQH8	315 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	NDUFAF7	Q7L592	441 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	DNAJB14	Q8TBM8	379 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	C16orf78	Q8WTQ4	265 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	ANKRD9	Q96BM1	317 aa	Predicted RBP	19.47	■□□□□ 0.71
CD44-222	ENST00000526025	TUBGCP3	Q96CW5	907 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	TUBB6	Q9BUF5	446 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	NUF2	Q9BZD4	464 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	SLCO1B3	Q9NPD5	702 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	NECTIN3	Q9NQS3	549 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	FBXL4	Q9UKA2	621 aa		19.47	■□□□□ 0.71
CD44-222	ENST00000526025	ATP6AP2	A0A1C7CYW4	349 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	OR2W5	A6NFC9	320 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	ATP6AP2	O75787	350 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	TGDS	O95455	350 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	GPR75	O95800	540 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	SOX8	P57073	446 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	TAS2R50	P59544	299 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	AP2B1	P63010	937 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	EMX2	Q04743	252 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	STX4	Q12846	297 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	PCOLCE	Q15113	449 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	COL28A1	Q2UY09	1125 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	GALNTL6	Q49A17	601 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	DCAF10	Q5QP82	559 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	FAAH2	Q6GMR7	532 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	BORA	Q6PGQ7	559 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	LANCL3	Q6ZV70	420 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	WDR75	Q8IWA0	830 aa	Known RBP	19.46	■□□□□ 0.71
CD44-222	ENST00000526025	ZNF764	Q96H86	408 aa	Predicted RBP	19.46	■□□□□ 0.71
CD44-222	ENST00000526025	PELO	Q9BRX2	385 aa	Known RBP	19.46	■□□□□ 0.71
CD44-222	ENST00000526025	EBPL	Q9BY08	206 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	MARCO	Q9UEW3	520 aa	Predicted RBP	19.46	■□□□□ 0.71
CD44-222	ENST00000526025	CES1P1	Q9UKY3	287 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	DLGAP4	Q9Y2H0	992 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	POLR3H	Q9Y535	204 aa	Predicted RBP	19.46	■□□□□ 0.71
CD44-222	ENST00000526025	KCNMB2	Q9Y691	235 aa		19.46	■□□□□ 0.71
CD44-222	ENST00000526025	KMT2B	Q9UMN6	2715 aa	Predicted RBP	19.45	■□□□□ 0.7
CD44-222	ENST00000526025	TGFBR3L	H3BV60	316 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	ZNF195	O14628	629 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	FGF17	O60258	216 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	PEX11A	O75192	247 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	IL3	P08700	152 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	PRPS2	P11908	318 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	ALOX15	P16050	662 aa	Predicted RBP	19.45	■□□□□ 0.7
CD44-222	ENST00000526025	SDC1	P18827	310 aa		19.45	■□□□□ 0.7
CD44-222	ENST00000526025	GALNS	P34059	522 aa		19.45	■□□□□ 0.7

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