RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SCELO95171 688 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CHEK2O96017 543 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 FGF4P08620 206 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CT62P0C5K7 136 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NR2F6P10588 404 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ITGAMP11215 1152 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SDC1P18827 310 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TNNI3P19429 210 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF10P21506 573 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 JAK1P23458 1154 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 GRK2P25098 689 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ITGA3P26006 1051 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TIA1P31483 386 aaKnown RBP eCLIP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RPL14P50914 215 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 HK2P52789 917 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 DIO3P55073 304 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 UCNP55089 124 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 POLE2P56282 527 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 OCRLQ01968 901 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TNFRSF17Q02223 184 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 C2orf80Q0P641 193 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 STX4Q12846 297 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 KIAA0040Q15053 153 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SLC9B1Q4ZJI4 515 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ATP6AP1LQ52LC2 224 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF385BQ569K4 471 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 XKR7Q5GH72 579 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 DCAF10Q5QP82 559 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 IL23RQ5VWK5 629 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ATG16L1Q676U5 607 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NXNQ6DKJ4 435 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NOXRED1Q6NXP6 359 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 BORAQ6PGQ7 559 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 FAM111BQ6SJ93 734 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PCSK4Q6UW60 755 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM205Q6UW68 189 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 LINC00696Q6ZRV3 163 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TRIM46Q7Z4K8 759 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PTRH1Q86Y79 214 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RAB43Q86YS6 212 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TICAM1Q8IUC6 712 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SCUBE1Q8IWY4 988 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CNPY4Q8N129 248 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ZCCHC7Q8N3Z6 543 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 LIX1Q8N485 282 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 KRTCAP2Q8N6L1 136 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 GBP7Q8N8V2 638 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 FNDC5Q8NAU1 212 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SRFBP1Q8NEF9 429 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ADCY4Q8NFM4 1077 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 FDCSPQ8NFU4 85 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RFWD2Q8NHY2 731 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 DNAJB14Q8TBM8 379 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 APOBEC4Q8WW27 367 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CKAP2Q8WWK9 683 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CIDECQ96AQ7 238 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ABHD17AQ96GS6 310 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 THOC3Q96J01 351 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SEC16BQ96JE7 1060 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 MAGED4Q96JG8 741 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 BBC3Q96PG8 261 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 OR1F2PQ96R84 312 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 OR52B2Q96RD2 323 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR77Q9BQA1 342 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TRMOQ9BU70 441 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 EFHD1Q9BUP0 239 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NUDT9Q9BW91 350 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NPLQ9BXD5 320 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 MFRPQ9BY79 579 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SEMA4CQ9C0C4 833 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ROGDIQ9GZN7 287 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF700Q9H0M5 742 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RPF2Q9H7B2 306 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 AKTIPQ9H8T0 292 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 LYRM4Q9HD34 91 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PRDM9Q9NQV7 894 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SEMA3GQ9NS98 782 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 C1orf109Q9NX04 203 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PLA2G3Q9NZ20 509 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 AHSPQ9NZD4 102 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PTGFRNQ9P2B2 879 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 PHF11Q9UIL8 331 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NXT1Q9UKK6 140 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 EXO1Q9UQ84 846 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TSC22D4Q9Y3Q8 395 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CSAG2Q9Y5P2 127 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SNRNP200O75643 2136 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 CACNA1AO00555 2505 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TRBV11-1A0A0K0K1C0 115 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 TCRBV16S1A1N1A0A5B0 115 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 SERTM1A2A2V5 107 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 C17orf105B2RV13 164 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 PYCARD-AS1I3L0S3 204 aa4.3□□□□□ -1.72
CHMP4A-202ENST00000524955 CLDN4O14493 209 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms