RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 FBXO8Q9NRD0 319 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 SLC6A13Q9NSD5 602 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DIAPH3Q9NSV4 1193 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DNAJC17Q9NVM6 304 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 SPASTQ9UBP0 616 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 DDX25Q9UHL0 483 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 CYTH4Q9UIA0 394 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CPSF3Q9UKF6 684 aaKnown RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 ODF2LQ9ULJ1 636 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 PLA2G4CQ9UP65 541 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 ERVW-1Q9UQF0 538 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 RPH3AQ9Y2J0 694 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 DGKBQ9Y6T7 804 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CAPN7Q9Y6W3 813 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 COL27A1Q8IZC6 1860 aaPredicted RBP1.45□□□□□ -2.18
CD44-212ENST00000524922 SVEP1Q4LDE5 3571 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 CNTRLQ7Z7A1 2325 aa1.45□□□□□ -2.18
CD44-212ENST00000524922 MYO18AQ92614 2054 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 HELZP42694 1942 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 PTPRJQ12913 1337 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ROS1P08922 2347 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 SHANK1Q9Y566 2161 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LRRK1Q38SD2 2015 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TEX13CA0A0J9YWL9 993 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 A0A0U1RQS6 177 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 FAM237AA0A1B0GTK4 181 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 EDDM13A0A1B0GTR0 161 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LRRIQ4A6NIV6 560 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 DUXAA6NLW8 204 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TGFB1I1O43294 461 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ZBTB43O43298 467 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 AQP9O43315 295 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 COCHO43405 550 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 HUS1O60921 280 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 GUCY1B2O75343 617 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CPNE6O95741 557 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NR3C1P04150 777 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 THRAP10827 490 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 IRF1P10914 325 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CD99P14209 185 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LIFP15018 202 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 HNRNPA2B1P22626 353 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 NFKBIAP25963 317 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TEAD1P28347 426 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TLX1P31314 330 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 AKT2P31751 481 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ACSL1P33121 698 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 HSPA4P34932 840 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 GGT5P36269 586 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PGM1P36871 562 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PRPHP41219 470 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 WNT5AP41221 380 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TNFSF9P41273 254 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TSFMP43897 325 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 PLK1P53350 603 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 AP3M2P53677 418 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PFN3P60673 137 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 HAND2P61296 217 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PPARDQ03181 441 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 IL11RAQ14626 422 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NUMA1Q14980 2115 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TMEM132DQ14C87 1099 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CHRNA6Q15825 494 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 MYLK3Q32MK0 819 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ZSCAN23Q3MJ62 389 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 C14orf28Q4W4Y0 310 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 MPPE1Q53F39 396 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 FAM133BQ5BKY9 247 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 TCTE1Q5JU00 501 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 HYIQ5T013 277 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NSUN5P2Q63ZY6 315 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NCEH1Q6PIU2 408 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 WDR74Q6RFH5 385 aaPredicted RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 IGFL2Q6UWQ7 119 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 KDM7AQ6ZMT4 941 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 MACC1Q6ZN28 852 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PLEKHM3Q6ZWE6 761 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CCDC186Q7Z3E2 898 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 SYVN1Q86TM6 617 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ADIPOR2Q86V24 386 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 GPR180Q86V85 440 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 UNC93AQ86WB7 457 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 CATSPER3Q86XQ3 398 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 WDR49Q8IV35 697 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 SMC5Q8IY18 1101 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ADGRF2Q8IZF7 708 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LRRC75A-AS1Q8N1F1 130 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NUP93Q8N1F7 819 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 PDCL2Q8N4E4 241 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 EID2Q8N6I1 236 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 FRMD1Q8N878 549 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 ANKRD52Q8NB46 1076 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 TMEM161BQ8NDZ6 487 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 OR4D9Q8NGE8 314 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 OR8K5Q8NH50 307 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LMX1AQ8TE12 382 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 LRRC15Q8TF66 581 aa1.44□□□□□ -2.18
CD44-212ENST00000524922 NOC3LQ8WTT2 800 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 PHF10Q8WUB8 498 aaKnown RBP1.44□□□□□ -2.18
CD44-212ENST00000524922 ZNRF4Q8WWF5 429 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms