RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MRPS33Q9Y291 106 aaKnown RBP16.68■□□□□ 0.26
CLK4-211ENST00000522556 TRBV11-1A0A0K0K1C0 115 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 CLDN4O14493 209 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 KLHL41O60662 606 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 CTNSO60931 367 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 SEMA3DO95025 777 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 KLK1P06870 262 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 CPA3P15088 417 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 CCT5P48643 541 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 TNFSF10P50591 281 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 GPR143P51810 404 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 TBL3Q12788 808 aaKnown RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 LCP2Q13094 533 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 ZNF169Q14929 603 aaPredicted RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 CCDC153Q494R4 210 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 ABHD17BQ5VST6 288 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 C16orf47Q6ZP98 133 aaPredicted RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 COMMD6Q7Z4G1 85 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 NUDT13Q86X67 352 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 CCDC63Q8NA47 563 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 B3GNT7Q8NFL0 401 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 PTPMT1Q8WUK0 201 aaPredicted RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 NCLNQ969V3 563 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 CENPKQ9BS16 269 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 MECRQ9BV79 373 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 HES7Q9BYE0 225 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 ALOXE3Q9BYJ1 711 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 LIN28AQ9H9Z2 209 aaKnown RBP16.67■□□□□ 0.26
CLK4-211ENST00000522556 MID1IP1Q9NPA3 183 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 ADAP2Q9NPF8 381 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 MKS1Q9NXB0 559 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 MAP10Q9P2G4 905 aa16.67■□□□□ 0.26
CLK4-211ENST00000522556 HRKO00198 91 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 PROM1O43490 865 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 IFNA16P05015 189 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 IGLV3-21P80748 117 aaPredicted RBP16.66■□□□□ 0.26
CLK4-211ENST00000522556 HMGCS1Q01581 520 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 FOLH1Q04609 750 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 FRMD7Q6ZUT3 714 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 IQCKQ8N0W5 287 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 METTL4Q8N3J2 472 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 OR1N1Q8NGS0 311 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 PPWD1Q96BP3 646 aaKnown RBP16.66■□□□□ 0.26
CLK4-211ENST00000522556 SIGLEC12Q96PQ1 595 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 FAM111AQ96PZ2 611 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 ACPTQ9BZG2 426 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 CDCP1Q9H5V8 836 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
CLK4-211ENST00000522556 OXSMQ9NWU1 459 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 PSD3Q9NYI0 1048 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 STMN3Q9NZ72 180 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 PHF11Q9UIL8 331 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 SNX6Q9UNH7 406 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 PLLPQ9Y342 182 aa16.66■□□□□ 0.26
CLK4-211ENST00000522556 RELNP78509 3460 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 DYTNA2CJ06 578 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 OR5H15A6NDH6 313 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 GABRR3A8MPY1 467 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 PGRMC2O15173 223 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 MLYCDO95822 493 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 DDAH2O95865 285 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 NR2F6P10588 404 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 SERPINB3P29508 390 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 HMOX2P30519 316 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TSFMP43897 325 aaKnown RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 STX4Q12846 297 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TUBA3CQ13748 450 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TLR1Q15399 786 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 KRT71Q3SY84 523 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TUBA3EQ6PEY2 450 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 CYP20A1Q6UW02 462 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 C1orf52Q8N6N3 182 aaKnown RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 MYRIPQ8NFW9 859 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 RDH11Q8TC12 318 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 METTL6Q8TCB7 284 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 HAS2Q92819 552 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TMEM109Q9BVC6 243 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 GATA5Q9BWX5 397 aaPredicted RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 SLC29A3Q9BZD2 475 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 ROPN1BQ9BZX4 212 aaPredicted RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 ROPN1Q9HAT0 212 aaPredicted RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 LYARQ9NX58 379 aaKnown RBP16.65■□□□□ 0.26
CLK4-211ENST00000522556 VTI1BQ9UEU0 232 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 PTGDR2Q9Y5Y4 395 aa16.65■□□□□ 0.26
CLK4-211ENST00000522556 TMEM200CA6NKL6 621 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ESRRBO95718 433 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 GNLYP22749 145 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ALDH3A1P30838 453 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 PTGER1P34995 402 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ARFIP1P53367 373 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 DNAJB13P59910 316 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 PMP22Q01453 160 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 MRPL49Q13405 166 aaKnown RBP16.64■□□□□ 0.25
CLK4-211ENST00000522556 RCN2Q14257 317 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 ELAVL1Q15717 326 aaKnown RBP16.64■□□□□ 0.25
CLK4-211ENST00000522556 ZNF750Q32MQ0 723 aa16.64■□□□□ 0.25
CLK4-211ENST00000522556 RPS19BP1Q86WX3 136 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms