RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 ATG4BQ9Y4P1 393 aa20.06■□□□□ 0.8
HOXA3-204ENST00000521401 SPACA6W5XKT8 324 aa20.06■□□□□ 0.8
HOXA3-204ENST00000521401 FOXE1O00358 373 aaPredicted RBP20.05■□□□□ 0.8
HOXA3-204ENST00000521401 FCHO1O14526 889 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 FGF17O60258 216 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 EEDO75530 441 aaKnown RBP20.05■□□□□ 0.8
HOXA3-204ENST00000521401 ITGA10O75578 1167 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 ZFAND5O76080 213 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 RPS17P08708 135 aaKnown RBP20.05■□□□□ 0.8
HOXA3-204ENST00000521401 RAP1GDS1P52306 607 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 TRAF3Q13114 568 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 CUL3Q13618 768 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 SERTAD2Q14140 314 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 MAPKAPK3Q16644 382 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 C1QL3Q5VWW1 255 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 SIAH3Q8IW03 269 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 MORN4Q8NDC4 146 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 DAZLQ92904 295 aaKnown RBP20.05■□□□□ 0.8
HOXA3-204ENST00000521401 RELTQ969Z4 430 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 MRPL46Q9H2W6 279 aaKnown RBP20.05■□□□□ 0.8
HOXA3-204ENST00000521401 PPT2Q9UMR5 302 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 CLCA3PQ9Y6N3 262 aa20.05■□□□□ 0.8
HOXA3-204ENST00000521401 A0A0A6YYD5 115 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 A0A1B0GTL3 188 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 TMPRSS11DO60235 418 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 SMIM24O75264 130 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 PRKRAO75569 313 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 PHEXP78562 749 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 TNFRSF17Q02223 184 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 C18orf63Q68DL7 685 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 RPS27LQ71UM5 84 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 GPR180Q86V85 440 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 OR4N5Q8IXE1 308 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 OR14A16Q8NHC5 309 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 GPR137Q96N19 417 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 CENPKQ9BS16 269 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 RPF2Q9H7B2 306 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 DDX31Q9H8H2 851 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 LIN28AQ9H9Z2 209 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 MS4A12Q9NXJ0 267 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 ASB4Q9Y574 426 aa20.04■□□□□ 0.8
HOXA3-204ENST00000521401 SPTAN1Q13813 2472 aaKnown RBP20.04■□□□□ 0.8
HOXA3-204ENST00000521401 A0A1B0GUH1 482 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 A8MT66 165 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 C17orf105B2RV13 164 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 PPP6CO00743 305 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 PROM1O43490 865 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 CCNG1P51959 295 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 ALDH6A1Q02252 535 aaKnown RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 RNFT1Q5M7Z0 435 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 MAMDC2Q7Z304 686 aaPredicted RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 FJX1Q86VR8 437 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 SLC2A12Q8TD20 617 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 ZNF483Q8TF39 744 aaPredicted RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 ATP6V1E2Q96A05 226 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 MTFMTQ96DP5 389 aaKnown RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 TRIM44Q96DX7 344 aaPredicted RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 CCDC77Q9BR77 488 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 C1QTNF3Q9BXJ4 246 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 MYOTQ9UBF9 498 aa20.03■□□□□ 0.8
HOXA3-204ENST00000521401 YARS2Q9Y2Z4 477 aaKnown RBP20.03■□□□□ 0.8
HOXA3-204ENST00000521401 A0A1W2PR48 441 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 WASHC1A8K0Z3 465 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 TNNI3P19429 210 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 STT3AP46977 705 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 SLC29A2Q14542 456 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 GGTA1PQ4G0N0 100 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 LGSNQ5TDP6 509 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 FRG2Q64ET8 278 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 HSDL2Q6YN16 418 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 DGAT2L6Q6ZPD8 337 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 MDGA2Q7Z553 956 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 GSPT2Q8IYD1 628 aaKnown RBP20.02■□□□□ 0.8
HOXA3-204ENST00000521401 CPSF7Q8N684 471 aaKnown RBP20.02■□□□□ 0.8
HOXA3-204ENST00000521401 FAM98AQ8NCA5 519 aaKnown RBP20.02■□□□□ 0.8
HOXA3-204ENST00000521401 OR4F6Q8NGB9 312 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 ZNF721Q8TF20 911 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 MTBPQ96DY7 904 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 FRG2BQ96QU4 278 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 OR8D2Q9GZM6 311 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 TSPAN10Q9H1Z9 355 aaPredicted RBP20.02■□□□□ 0.8
HOXA3-204ENST00000521401 SEMA4BQ9NPR2 832 aaPredicted RBP20.02■□□□□ 0.8
HOXA3-204ENST00000521401 TMEM216Q9P0N5 145 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 PHF11Q9UIL8 331 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 DOPEY1Q5JWR5 2465 aa20.02■□□□□ 0.8
HOXA3-204ENST00000521401 SVILO95425 2214 aa20.02■□□□□ 0.79
HOXA3-204ENST00000521401 NPIPA5E9PKD4 350 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 ZG16O60844 167 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 OR2J2O76002 312 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 COL8A1P27658 744 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 SSR4P51571 173 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 HK2P52789 917 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 CDH13P55290 713 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 FOLH1Q04609 750 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 KRTCAP3Q53RY4 240 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 FAM219BQ5XKK7 198 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 ZGRF1Q86YA3 2104 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 SULF2Q8IWU5 870 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 CYP4Z2PQ8N1L4 340 aa20.01■□□□□ 0.79
HOXA3-204ENST00000521401 TMEM156Q8N614 296 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms