RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 C21orf59P57076 290 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 SELENOWP63302 87 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 VLDLRP98155 873 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PLIN5Q00G26 463 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 EMX1Q04741 257 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 UBE3AQ05086 875 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 DMPKQ09013 629 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ZNF763Q0D2J5 394 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TMEM115Q12893 351 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 NAE1Q13564 534 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ZNF846Q147U1 533 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 RGNQ15493 299 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TBCEQ15813 527 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 NEDD8Q15843 81 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PGS1Q32NB8 556 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TMEM52BQ4KMG9 183 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 XKR6Q5GH73 641 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CRB2Q5IJ48 1285 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PAGE2BQ5JRK9 111 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CPTPQ5TA50 214 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 LAIR1Q6GTX8 287 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 FAM71E1Q6IPT2 247 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ZCCHC8Q6NZY4 707 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 ERAP2Q6P179 960 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 MED27Q6P2C8 311 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 LCTLQ6UWM7 567 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 Q6ZVL8 140 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CHST15Q7LFX5 561 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 TSEN54Q7Z6J9 526 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 FAM124AQ86V42 546 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ANKRD46Q86W74 232 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CCDC71Q8IV32 467 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 METTL4Q8N3J2 472 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 RASGEF1AQ8N9B8 481 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 C11orf65Q8NCR3 313 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TMIEQ8NEW7 156 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 OR7A2PQ8NGA2 310 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 OR9A1PQ8NGU1 263 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 HUS1BQ8NHY5 278 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PHF10Q8WUB8 498 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 S100ZQ8WXG8 99 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 SGCDQ92629 289 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 SCAMP4Q969E2 229 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ABTB1Q969K4 478 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 UBE2E3Q969T4 207 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TMEM159Q96B96 161 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PYCR2Q96C36 320 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 MTFMTQ96DP5 389 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 MED30Q96HR3 178 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PLEKHA8Q96JA3 519 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 FOPNLQ96NB1 174 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PANX1Q96RD7 426 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 BARD1Q99728 777 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 DOHHQ9BU89 302 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 RIOK2Q9BVS4 552 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 BTBD2Q9BX70 525 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 BBS2Q9BXC9 721 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 WDR12Q9GZL7 423 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 PITHD1Q9GZP4 211 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 RSPH9Q9H1X1 276 aaPredicted RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 RHBGQ9H310 441 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 REEP4Q9H6H4 257 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 NT5DC2Q9H857 520 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 SGK2Q9HBY8 427 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 DIABLOQ9NR28 239 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ATAD3AQ9NVI7 634 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 THUMPD1Q9NXG2 353 aaKnown RBP4.82□□□□□ -1.64
SDC2-204ENST00000519914 SCN3BQ9NY72 215 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 VPS4AQ9UN37 437 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 GPR34Q9UPC5 381 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CCL26Q9Y258 94 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 ERGIC3Q9Y282 383 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 BTBD3Q9Y2F9 522 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 TRIM17Q9Y577 477 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 KCNE2Q9Y6J6 123 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 A3GALT2U3KPV4 340 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 COL4A3Q01955 1670 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 CCDC88CQ9P219 2028 aa4.82□□□□□ -1.64
SDC2-204ENST00000519914 BRCA2P51587 3418 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 MYO10Q9HD67 2058 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 HEATR5BQ9P2D3 2071 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 OR2A25A4D2G3 310 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 FITM1A5D6W6 292 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 A8MX80 341 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 SUV39H1O43463 412 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 RGS10O43665 173 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 PI15O43692 258 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 VEGFDO43915 354 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 SH3BP5O60239 455 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 PCDH7O60245 1069 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 PSPNO60542 156 aa4.81□□□□□ -1.64
SDC2-204ENST00000519914 MITFO75030 526 aaPredicted RBP4.81□□□□□ -1.64
SDC2-204ENST00000519914 WBP4O75554 376 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms