RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 SLC2A12Q8TD20 617 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 ZNF473Q8WTR7 871 aaKnown RBP10.09□□□□□ -0.79
PVT1-208ENST00000519481 PTPMT1Q8WUK0 201 aaPredicted RBP10.09□□□□□ -0.79
PVT1-208ENST00000519481 CMTM7Q96FZ5 175 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 ART5Q96L15 291 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 UBXN10Q96LJ8 280 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 DGAT2Q96PD7 388 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 FAM173AQ9BQD7 235 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 MS4A8Q9BY19 250 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 ENKD1Q9H0I2 346 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 ALG9Q9H6U8 611 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 KCNJ16Q9NPI9 418 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 MS4A12Q9NXJ0 267 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 OPTCQ9UBM4 332 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 UTP11Q9Y3A2 253 aaKnown RBP10.09□□□□□ -0.79
PVT1-208ENST00000519481 ANGPTL3Q9Y5C1 460 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 CLDN16Q9Y5I7 305 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 POLQO75417 2590 aa10.09□□□□□ -0.79
PVT1-208ENST00000519481 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 MYOCOSA0A1B0GUC4 107 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 OR14I1A6ND48 311 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 TMEM200CA6NKL6 621 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 FAM159BA6NKW6 160 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 FIGNL2A6NMB9 653 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 FAM90A27PA6NNH2 459 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 SYCE1LA8MT33 242 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 NPIPA2E9PIF3 369 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 NPIPA3F8WFD2 350 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 K7EPI3 171 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 BCKDKO14874 412 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 PRAMEF4O60810 478 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 TBX6O95947 436 aaPredicted RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 TGFB1P01137 390 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 LTA4HP09960 611 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 CD22P20273 847 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 STX2P32856 288 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 RNF4P78317 190 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 MRPS25P82663 173 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 CAV1Q03135 178 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 TBL3Q12788 808 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 ZKSCAN8Q15776 578 aaPredicted RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 ZNF750Q32MQ0 723 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 PRAMEF9Q5VWM5 478 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 ADNP2Q6IQ32 1131 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 FAM47EQ6ZV65 393 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 CCDC25Q86WR0 208 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 MYLK4Q86YV6 388 aaPredicted RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 FAM109AQ8N4B1 249 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 LILRB4Q8NHJ6 448 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 SLC22A8Q8TCC7 542 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 SREK1Q8WXA9 508 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 RGMAQ96B86 450 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 RBM18Q96H35 190 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 SMC6Q96SB8 1091 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 MAPKAP1Q9BPZ7 522 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 TTTY12Q9BZ98 90 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 RAB17Q9H0T7 212 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 LDAHQ9H6V9 325 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 EXO5Q9H790 373 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 IL1RL2Q9HB29 575 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 MCCC2Q9HCC0 563 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 DEPPQ9NTK1 212 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
PVT1-208ENST00000519481 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.08□□□□□ -0.8
PVT1-208ENST00000519481 PHF11Q9UIL8 331 aa10.08□□□□□ -0.8
PVT1-208ENST00000519481 FBN2P35556 2912 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 G3V3Y1 287 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 RTCAO00442 366 aaKnown RBP10.07□□□□□ -0.8
PVT1-208ENST00000519481 KERAO60938 352 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 SH3BGRLO75368 114 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 SCELO95171 688 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 EPB42P16452 691 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 BUD31P41223 144 aaPredicted RBP10.07□□□□□ -0.8
PVT1-208ENST00000519481 PLTPP55058 493 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 PLIN5Q00G26 463 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 ID2Q02363 134 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 PMPCAQ10713 525 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 SLAMF1Q13291 335 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 NAB1Q13506 487 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 DDX39BQ13838 428 aaKnown RBP10.07□□□□□ -0.8
PVT1-208ENST00000519481 SLC10A1Q14973 349 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 MPEG1Q2M385 716 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 KBTBD12Q3ZCT8 623 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 GXYLT1Q4G148 440 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 DEPDC1Q5TB30 811 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 KHDRBS2Q5VWX1 349 aaKnown RBP10.07□□□□□ -0.8
PVT1-208ENST00000519481 OR4C11Q6IEV9 310 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 ZNF585AQ6P3V2 769 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 ZNF793Q6ZN11 406 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 CCDC91Q7Z6B0 441 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 UBE3DQ7Z6J8 389 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 CDH24Q86UP0 819 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 LAS2Q8IYD9 372 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 SPATA4Q8NEY3 305 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 OR7G3Q8NG95 312 aa10.07□□□□□ -0.8
PVT1-208ENST00000519481 OR10Q1Q8NGQ4 319 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms