RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RBM18Q96H35 190 aaKnown RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 CDKN2AIPNLQ96HQ2 116 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 DESI2Q9BSY9 194 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 UBXN6Q9BZV1 441 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 LRRCC1Q9C099 1032 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 RWDD1Q9H446 243 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 THAP10Q9P2Z0 257 aaPredicted RBP3.04□□□□□ -1.92
VPS13B-207ENST00000518569 EXTL2Q9UBQ6 330 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 UBQLN2Q9UHD9 624 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 BAIAP2L1Q9UHR4 511 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 MUTYHQ9UIF7 546 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 MOB4Q9Y3A3 225 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 AP1M2Q9Y6Q5 423 aa3.04□□□□□ -1.92
VPS13B-207ENST00000518569 URB2Q14146 1524 aaKnown RBP3.03□□□□□ -1.92
VPS13B-207ENST00000518569 MYH15Q9Y2K3 1946 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 UMODL1Q5DID0 1318 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 A0A087X0K7 114 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 A0A1W2PPR1 153 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 MAGEB16A2A368 324 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 GLTPD2A6NH11 291 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 POLR3GO15318 223 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-207ENST00000518569 SIGLEC5O15389 551 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 CRCPO75575 148 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 LETM1O95202 739 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-207ENST00000518569 APBB3O95704 486 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 ANGPTL1O95841 491 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 TPM3P06753 285 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 GAP43P17677 238 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 HOXD10P28358 340 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 CD86P42081 329 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 CRYBA2P53672 197 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 FKBP1BP68106 108 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 IL1RL1Q01638 556 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 PAX8Q06710 450 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 GCKRQ14397 625 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 NFE2L1Q14494 772 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 MORF4L2Q15014 288 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 PPP1R7Q15435 360 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 LPAL2Q16609 132 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 RAB12Q6IQ22 244 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 IYDQ6PHW0 289 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 PAQR6Q6TCH4 344 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 ADCK1Q86TW2 530 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 AQP12AQ8IXF9 295 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 SYCP3Q8IZU3 236 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 ELMOD1Q8N336 334 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 OR52B6Q8NGF0 335 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 OR13C5Q8NGS8 318 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 C8orf46Q8TAG6 207 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 SPPL2AQ8TCT8 520 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 NPRL2Q8WTW4 380 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 C17orf50Q8WW18 174 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 SEPT8Q92599 483 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 SLC35C1Q96A29 364 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 BPIFA2Q96DR5 249 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 RUNDC3BQ96NL0 473 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 ACAT2Q9BWD1 397 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 PINK1Q9BXM7 581 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 FUT8Q9BYC5 575 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 STMN4Q9H169 189 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-207ENST00000518569 TNMDQ9H2S6 317 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 CUEDC2Q9H467 287 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 TUBB1Q9H4B7 451 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 IL1RAPL2Q9NP60 686 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 CTSZQ9UBR2 303 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 LAMP5Q9UJQ1 280 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 KLK13Q9UKR3 277 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 PLCL2Q9UPR0 1127 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 ITM2BQ9Y287 266 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 KDM6BO15054 1643 aa3.03□□□□□ -1.92
VPS13B-207ENST00000518569 COL5A2P05997 1499 aaPredicted RBP3.03□□□□□ -1.93
VPS13B-207ENST00000518569 FANCD2Q9BXW9 1451 aa3.03□□□□□ -1.93
VPS13B-207ENST00000518569 CENPJQ9HC77 1338 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CLRN2A0PK11 232 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 SHISA7A6NL88 538 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 TMCO5BA8MYB1 307 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 M0QX08 132 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 SGK1O00141 431 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ZNF263O14978 683 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 P2RX6O15547 441 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 KLHL41O60662 606 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 SEC22BO75396 215 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 STAM2O75886 525 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CCDC172P0C7W6 258 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 TOP1P11387 765 aaKnown RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CD9P21926 228 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 IL10P22301 178 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 FCGR2BP31994 310 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 FCGR2CP31995 323 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 CAPGP40121 348 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 EPS15P42566 896 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 IFNAR2P48551 515 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 SULT1E1P49888 294 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 TKTL1P51854 596 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 ABCE1P61221 599 aaKnown RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 BTG1P62324 171 aa3.02□□□□□ -1.93
VPS13B-207ENST00000518569 FKBP3Q00688 224 aaKnown RBP3.02□□□□□ -1.93
VPS13B-207ENST00000518569 MS4A2Q01362 244 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms