RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CPED1A4D0V7 1026 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 M0QZQ0 153 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 KMOO15229 486 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 GPR39O43194 453 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 PTTG1O95997 202 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 ARPC4P59998 168 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 CTBSQ01459 385 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 KEAP1Q14145 624 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 XKR7Q5GH72 579 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 DLEU7Q6UYE1 221 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 HMGN2P46Q86SG4 172 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 GPR149Q86SP6 731 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 GEMIN6Q8WXD5 167 aaKnown RBP10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZNF486Q96H40 463 aaPredicted RBP10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZFP3Q96NJ6 502 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 ELAC1Q9H777 363 aaKnown RBP10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 INIPQ9NRY2 104 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 EVA1BQ9NVM1 165 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 ABCG2Q9UNQ0 655 aa10.4□□□□□ -0.75
PCDHGA1-202ENST00000517417 CEP290O15078 2479 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 MUSKO15146 869 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 TGM5O43548 720 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACRV1P26436 265 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CSTF2P33240 577 aaKnown RBP eCLIP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM189BP81408 668 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 SUZ12Q15022 739 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 XKR4Q5GH76 650 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 TOR1AIP1Q5JTV8 583 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CST9Q5W186 159 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 C9orf43Q8TAL5 461 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 GFM1Q96RP9 751 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 MCCC1Q96RQ3 725 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 LINC00597Q9H2U6 94 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 PNO1Q9NRX1 252 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 A0A075B6Q4 140 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 DAPL1A0PJW8 107 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 AGAP5A6NIR3 686 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 NDUFS1P28331 727 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 IL12BP29460 328 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZNF763Q0D2J5 394 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 PNCKQ6P2M8 343 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 ERN2Q76MJ5 926 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 RIMKLAQ8IXN7 391 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 AQP11Q8NBQ7 271 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 JPH3Q8WXH2 748 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC25A36Q96CQ1 311 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CCDC115Q96NT0 180 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 GPER1Q99527 375 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 ERVK13-1Q9NX77 482 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 GPRC5BQ9NZH0 403 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 COPS7AQ9UBW8 275 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 ARID2Q68CP9 1835 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 TMEM150CB9EJG8 249 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 BPIP17213 487 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CLCN7P51798 805 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CLDN8P56748 225 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 AAK1Q2M2I8 961 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 CHST14Q8NCH0 376 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 SMPDL3BQ92485 455 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 PRRG4Q9BZD6 226 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 TP63Q9H3D4 680 aaPredicted RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 NTN4Q9HB63 628 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 GPR83Q9NYM4 423 aa10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 RPL36Q9Y3U8 105 aaKnown RBP10.39□□□□□ -0.75
PCDHGA1-202ENST00000517417 RTCAO00442 366 aaKnown RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 TLX2O43763 284 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 MMP2P08253 660 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 POLR2CP19387 275 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 RORCP51449 518 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 ISL1P61371 349 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CD300CQ08708 224 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CTSL3PQ5NE16 218 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 PLEKHS1Q5SXH7 462 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 XAF1Q6GPH4 301 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 MRPL10Q7Z7H8 261 aaKnown RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CCDC116Q8IYX3 515 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 BADQ92934 168 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 MS4A12Q9NXJ0 267 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM25EA8MYX2 175 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 SMAD6O43541 496 aaKnown RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 PRAMEF12O95522 483 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CFIP05156 583 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 SDC2P34741 201 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 DOC2AQ14183 400 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 PYCR3Q53H96 274 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CDH24Q86UP0 819 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 Q8N9G6 341 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 ASCC1Q8N9N2 400 aaKnown RBP10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 TRPV1Q8NER1 839 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 BACE2Q9Y5Z0 518 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 ASPDHA6ND91 283 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 CCRL2O00421 344 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 DLGAP1O14490 977 aa10.38□□□□□ -0.75
PCDHGA1-202ENST00000517417 KIAA0513O60268 411 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms