RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 KIAA1143Q96AT1 154 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 REPS1Q96D71 796 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TM4SF19Q96DZ7 209 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 L3HYPDHQ96EM0 354 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 WDR34Q96EX3 536 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MMABQ96EY8 250 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 C16orf92Q96LL3 132 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LRFN5Q96NI6 719 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF285Q96NJ3 590 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GBP5Q96PP8 586 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TMEM237Q96Q45 408 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MECRQ9BV79 373 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NTMT1Q9BV86 223 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SARGQ9BW04 601 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 C1QTNF3Q9BXJ4 246 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CHST8Q9H2A9 424 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KLHL31Q9H511 634 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 VIPAS39Q9H9C1 493 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GPN2Q9H9Y4 310 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ANKHQ9HCJ1 492 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZBTB26Q9HCK0 441 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF304Q9HCX3 659 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MLXIPLQ9NP71 852 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MID1IP1Q9NPA3 183 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RIC8BQ9NVN3 520 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NKIRAS1Q9NYS0 192 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 IFT80Q9P2H3 777 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DKK4Q9UBT3 224 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CDC14AQ9UNH5 594 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RNF11Q9Y3C5 154 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MAU2Q9Y6X3 613 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SEC16AO15027 2179 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 COL27A1Q8IZC6 1860 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AHCTF1Q8WYP5 2266 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 A0A0A6YYC8 382 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 A0A1B0GX78 115 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TMEM120BA0PK00 339 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 C9J4A7 227 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 H0YIV9 168 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 I3L1I5 382 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SGK494L7N484 410 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FFAR3O14843 346 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DSCR3O14972 297 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TM9SF1O15321 606 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GPR42O15529 346 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRPF4O43172 522 aaKnown RBP eCLIP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 UGDHO60701 494 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SNRNP200O75643 2136 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR4F21O95013 312 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZWINTO95229 277 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MED26O95402 600 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KRT6AP02538 564 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KRT6BP04259 564 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CAPN1P07384 714 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 BPGMP07738 259 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SERPINA6P08185 405 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 H2AFB1P0C5Y9 115 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 H2AFB2P0C5Z0 115 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ALOX12P18054 663 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 IL1RNP18510 177 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CD22P20273 847 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ITPKBP27987 946 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SDHAP31040 664 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HPDP32754 393 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RORAP35398 523 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CD96P40200 585 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CCR10P46092 362 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 KRT6CP48668 564 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PLA2G16P53816 162 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NAA20P61599 178 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 STXBP1P61764 594 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RPS15P62841 145 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 BTN3A2P78410 334 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PHEXP78562 749 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SRSF2Q01130 221 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OCA2Q04671 838 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LCP2Q13094 533 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 IFT88Q13099 833 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SRSF6Q13247 344 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FAM53BQ14153 422 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SLC9A5Q14940 896 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PCLAFQ15004 111 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZRSR2Q15696 482 aaKnown RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DEFB134Q4QY38 66 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CT83Q5H943 113 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EMC4Q5J8M3 183 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TOR1AIP1Q5JTV8 583 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ARHGAP40Q5TG30 622 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ADNP2Q6IQ32 1131 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GRHL2Q6ISB3 625 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRMT9Q6P2P2 845 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GALNT18Q6P9A2 607 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GPRIN3Q6ZVF9 776 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SYVN1Q86TM6 617 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RNF175Q8N4F7 328 aa5.49□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CDYL2Q8N8U2 506 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms