RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 FBXW2Q9UKT8 454 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 EMCNQ9ULC0 261 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 CLCA3PQ9Y6N3 262 aa11.94□□□□□ -0.5
CLCN3-210ENST00000515420 FCHO1O14526 889 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 COPEO14579 308 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PROM1O43490 865 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PLIN3O60664 434 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PRAMEF2O60811 474 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 KRT6AP02538 564 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PROCP04070 461 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 KRT6BP04259 564 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 ENO1P06733 434 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 TUBBP07437 444 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 MYL2P10916 166 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 KRT6CP48668 564 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 TUBA3CQ13748 450 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 TUBA3EQ6PEY2 450 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 CYP20A1Q6UW02 462 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 FAM180AQ6UWF9 173 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 RPS27LQ71UM5 84 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 CLNKQ7Z7G1 428 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 RPS19BP1Q86WX3 136 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 METTL4Q8N3J2 472 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 MREGQ8N565 214 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 HORMAD2Q8N7B1 307 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 CATSPER1Q8NEC5 780 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 OR8K3Q8NH51 312 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 TRPC4APQ8TEL6 797 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 FAR1Q8WVX9 515 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 ANKRD9Q96BM1 317 aaPredicted RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PELOQ9BRX2 385 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 SORBS1Q9BX66 1292 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 DEFB126Q9BYW3 111 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 WDR41Q9HAD4 459 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
CLCN3-210ENST00000515420 PLA2G3Q9NZ20 509 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 LGALS13Q9UHV8 139 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 ATG4BQ9Y4P1 393 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 ASB4Q9Y574 426 aa11.93□□□□□ -0.5
CLCN3-210ENST00000515420 RELNP78509 3460 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 FLNCQ14315 2725 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 A0A1B0GTL3 188 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 CCDC151A5D8V7 595 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 SMIM23A6NLE4 172 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 GABRR3A8MPY1 467 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 A8MUA0 341 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 G3V2L1 256 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 PPP6CO00743 305 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 TMPRSS11DO60235 418 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 LDB3O75112 727 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 EEDO75530 441 aaKnown RBP11.92□□□□□ -0.5
CLCN3-210ENST00000515420 OR4F21O95013 312 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 IFNA16P05015 189 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 FAM58BPP0C7Q3 252 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 NR2F6P10588 404 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 COX7A2P14406 83 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 KRT4P19013 534 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 TRHRP34981 398 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-210ENST00000515420 MLF1P58340 268 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 DNAJB13P59910 316 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 PLIN5Q00G26 463 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 CSTF3Q12996 717 aaKnown RBP11.92□□□□□ -0.5
CLCN3-210ENST00000515420 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 GPRIN3Q6ZVF9 776 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 HOMEZQ8IX15 550 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 KIF2BQ8N4N8 673 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 AMER2Q8N7J2 671 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 BCORP1Q8N888 145 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-210ENST00000515420 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 DNAJB8Q8NHS0 232 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 PTPMT1Q8WUK0 201 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-210ENST00000515420 SELENOMQ8WWX9 145 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 NCLNQ969V3 563 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 C19orf60Q96EN9 201 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 CDCP1Q9H5V8 836 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 MAP10Q9P2G4 905 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
CLCN3-210ENST00000515420 TRBV11-1A0A0K0K1C0 115 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 SERTM1A2A2V5 107 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 MANBAO00462 879 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 DYRK3O43781 588 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 FGF17O60258 216 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 GUCY1B2O75343 617 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 CBX6O95503 412 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 ESRRBO95718 433 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 PDYNP01213 254 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 CRYABP02511 175 aaKnown RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 TSPAN8P19075 237 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 TPP2P29144 1249 aaPredicted RBP11.91□□□□□ -0.5
CLCN3-210ENST00000515420 HMOX2P30519 316 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 GALNSP34059 522 aa11.91□□□□□ -0.5
CLCN3-210ENST00000515420 CD96P40200 585 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms