RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 EPCAMP16422 314 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TAS2R50P59544 299 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TOR1AIP1Q5JTV8 583 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 NCEH1Q6PIU2 408 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 BPHLQ86WA6 291 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CMTM7Q96FZ5 175 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 P2RY13Q9BPV8 354 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 LRP5O75197 1615 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 FAM86C2PA6NEL3 165 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PLATP00750 562 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TNFP01375 233 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CA3P07451 260 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 STSP08842 583 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CTSAP10619 480 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TGM1P22735 817 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CXCR4P61073 352 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TSPAN5P62079 268 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PITPNAQ00169 270 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 HYAL2Q12891 473 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 POU4F3Q15319 338 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CXorf57Q6NSI4 855 aaKnown RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 SMARCD3Q6STE5 483 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TMIGD1Q6UXZ0 262 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 ZSWIM9Q86XI8 627 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 OR9A1PQ8NGU1 263 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 HSH2DQ96JZ2 352 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 C5orf34Q96MH7 638 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 NKX2-4Q9H2Z4 354 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 SFXN1Q9H9B4 322 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 GLS2Q9UI32 602 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CPED1A4D0V7 1026 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 ITGAMP11215 1152 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 IL4RP24394 825 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 DNASE1P24855 282 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 CDKN1CP49918 316 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 PCDH1Q08174 1060 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 NPRL3Q12980 569 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 DSC3Q14574 896 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 KLHL22Q53GT1 634 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 EOGTQ5NDL2 527 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TRNP1Q6NT89 227 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TOMM5Q8N4H5 51 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 NATD1Q8N6N6 113 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 GLYATL1Q969I3 302 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM80Q96HE8 168 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 MAPKAP1Q9BPZ7 522 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 BOCQ9BWV1 1114 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 KCNN2Q9H2S1 579 aa12.61□□□□□ -0.39
TCOF1-213ENST00000514442 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
TCOF1-213ENST00000514442 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 KRT33AO76009 404 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 GSRP00390 522 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 IFNGP01579 166 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 HNRNPA1P09651 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 AP3S2P59780 193 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 ABHD18Q0P651 414 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 FADDQ13158 208 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF789Q5FWF6 425 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 UBQLNLQ8IYU4 475 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 COQ8AQ8NI60 647 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 SLC22A18Q96BI1 424 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 DOK1Q99704 481 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 POPDC3Q9HBV1 291 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 CITO14578 2027 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TLR4O00206 839 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TYRP1P17643 537 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 DCTP40126 519 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 HSF5Q4G112 596 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 NTN4Q9HB63 628 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 ADAM12O43184 909 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 UGT2B10P36537 528 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 SNTA1Q13424 505 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 OR4D1Q15615 310 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 C18orf21Q32NC0 220 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 FAM180AQ6UWF9 173 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TTLQ8NG68 377 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 SMARCD2Q92925 531 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 PPP1R14AQ96A00 147 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 SLCO4A1Q96BD0 722 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 LRCH3Q96II8 777 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 PRDM8Q9NQV8 689 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 CUEDC1Q9NWM3 386 aaPredicted RBP12.6□□□□□ -0.39
TCOF1-213ENST00000514442 UTS2RQ9UKP6 389 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 HCN4Q9Y3Q4 1203 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 DNAJC15Q9Y5T4 150 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 TRAV6A0A075B6T7 132 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 ZCWPW2A0A1B0GU75 182 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 GLOD5A6NK44 160 aa12.6□□□□□ -0.39
TCOF1-213ENST00000514442 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms