RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CMC1Q7Z7K0 106 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 LAS2Q8IYD9 372 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 RNF175Q8N4F7 328 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 ACOT4Q8N9L9 421 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 BBOF1Q8ND07 529 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 SORBS1Q9BX66 1292 aaKnown RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 MCCC2Q9HCC0 563 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
SNHG4-208ENST00000514110 GRHL1Q9NZI5 618 aa11.31□□□□□ -0.6
SNHG4-208ENST00000514110 POLQO75417 2590 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNHG4-208ENST00000514110 RAD51CO43502 376 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 FGF17O60258 216 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 SCELO95171 688 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 TGFB1P01137 390 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 S100BP04271 92 aaPredicted RBP11.3□□□□□ -0.6
SNHG4-208ENST00000514110 SLC35E2BP0CK96 405 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 CCL3P10147 92 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 PCNAP12004 261 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 CNR1P21554 472 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
SNHG4-208ENST00000514110 CHRNB4P30926 498 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 MAGEA5P43359 124 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 PMPCAQ10713 525 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 FOXO1Q12778 655 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 CALCOCO2Q13137 446 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 SERTAD2Q14140 314 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 GXYLT1Q4G148 440 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 MED27Q6P2C8 311 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 PAOXQ6QHF9 649 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 RTL4Q6ZR62 310 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 RGS9BPQ6ZS82 235 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 LRRC70Q7Z2Q7 622 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 ISCA2Q86U28 154 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 SLC22A16Q86VW1 577 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 CTAGE3PQ8IX95 158 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 TMEM251Q8N6I4 163 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 SRFBP1Q8NEF9 429 aaKnown RBP11.3□□□□□ -0.6
SNHG4-208ENST00000514110 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 OR5M9Q8NGP3 310 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 OR8K3Q8NH51 312 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 ASB5Q8WWX0 329 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 RND1Q92730 232 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 FAM173AQ9BQD7 235 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 OR51B5Q9H339 312 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 PNPLA3Q9NST1 481 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 NUDT4Q9NZJ9 180 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 RNF14Q9UBS8 474 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 HCFC1P51610 2035 aa11.3□□□□□ -0.6
SNHG4-208ENST00000514110 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 UBXN8O00124 270 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 ACOT7O00154 380 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 HRKO00198 91 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SUPT3HO75486 399 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 TOXO94900 526 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 IGHG3P01860 377 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CELA3AP09093 270 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CAPN3P20807 821 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CPN2P22792 545 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SPRP35270 261 aaPredicted RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SSR2P43308 183 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 ASPHQ12797 758 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 TESK1Q15569 626 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 AP5B1Q2VPB7 878 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 TMEM35AQ53FP2 167 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 GRTP1Q5TC63 336 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 NDUFAF5Q5TEU4 345 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 KHDRBS2Q5VWX1 349 aaKnown RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 DGAT2L6Q6ZPD8 337 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 GK5Q6ZS86 529 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 FAM47EQ6ZV65 393 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CHSY3Q70JA7 882 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CDH24Q86UP0 819 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SPATA4Q8NEY3 305 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 OR5L2Q8NGL0 311 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 STAG3L4Q8TBR4 150 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 UBTD2Q8WUN7 234 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 CMTM7Q96FZ5 175 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SENP5Q96HI0 755 aaPredicted RBP11.29□□□□□ -0.6
SNHG4-208ENST00000514110 SMC6Q96SB8 1091 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 IL1RL2Q9HB29 575 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
SNHG4-208ENST00000514110 KCNJ16Q9NPI9 418 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms