RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 DEFB134Q4QY38 66 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 SLC48A1Q6P1K1 146 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 PRSS41Q7RTY9 318 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 RNF130Q86XS8 419 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 DNAJC22Q8N4W6 341 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 SUN3Q8TAQ9 357 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 FBXO30Q8TB52 745 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 MAL2Q969L2 176 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 NCLNQ969V3 563 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 RERGQ96A58 199 aaPredicted RBP12.15□□□□□ -0.46
PVT1-203ENST00000513868 PPWD1Q96BP3 646 aaKnown RBP12.15□□□□□ -0.46
PVT1-203ENST00000513868 CNRIP1Q96F85 164 aaPredicted RBP12.15□□□□□ -0.46
PVT1-203ENST00000513868 ZBED6CLQ96FA7 236 aaPredicted RBP12.15□□□□□ -0.46
PVT1-203ENST00000513868 C10orf90Q96M02 699 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 RNF145Q96MT1 663 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 ZNF681Q96N22 645 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
PVT1-203ENST00000513868 RAB33BQ9H082 229 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 GLIPR2Q9H4G4 154 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 RAPGEFL1Q9UHV5 662 aa12.15□□□□□ -0.46
PVT1-203ENST00000513868 URADA6NGE7 173 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 RAP2AP10114 183 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 ALOX12P18054 663 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 KDELR2P33947 212 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 PCGF2P35227 344 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 CRATP43155 626 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 GABRA4P48169 554 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 EPHA4P54764 986 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 LIM2P55344 173 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 GFERP55789 205 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 VSX2P58304 361 aaPredicted RBP12.14□□□□□ -0.47
PVT1-203ENST00000513868 VAC14Q08AM6 782 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 HSPB3Q12988 150 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 FADDQ13158 208 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 COL9A2Q14055 689 aaPredicted RBP12.14□□□□□ -0.47
PVT1-203ENST00000513868 MAP7Q14244 749 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 CEBPEQ15744 281 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 ZNF750Q32MQ0 723 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 FAM98BQ52LJ0 330 aaKnown RBP12.14□□□□□ -0.47
PVT1-203ENST00000513868 TLDC1Q6P9B6 456 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 FAM92BQ6ZTR7 304 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 ABHD13Q7L211 337 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 KANSL1Q7Z3B3 1105 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 GALNT10Q86SR1 603 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 SLC35F3Q8IY50 421 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 SHISA5Q8N114 240 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 CSNK1A1LQ8N752 337 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 TMEM105Q8N8V8 129 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 CENPNQ96H22 339 aaPredicted RBP12.14□□□□□ -0.47
PVT1-203ENST00000513868 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 ROGDIQ9GZN7 287 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 COQ10BQ9H8M1 238 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 NEUROD4Q9HD90 331 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 LRIT1Q9P2V4 623 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 CNOT11Q9UKZ1 510 aaKnown RBP12.14□□□□□ -0.47
PVT1-203ENST00000513868 DAPP1Q9UN19 280 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 SNX8Q9Y5X2 465 aa12.14□□□□□ -0.47
PVT1-203ENST00000513868 RNF103-CHMP3A0A140T963 221 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 KRT75O95678 551 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 FCGR1AP12314 374 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 GNSP15586 552 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 CKMT2P17540 419 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 SOAT1P35610 550 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 CHI3L1P36222 383 aaPredicted RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 CHRNB3Q05901 458 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 BIRC2Q13490 618 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 ATP6AP1Q15904 470 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 DEFB110Q30KQ9 67 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 NKAIN2Q5VXU1 208 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 C11orf74Q86VG3 221 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 EPHX4Q8IUS5 362 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 MCATQ8IVS2 390 aaKnown RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 CATSPER1Q8NEC5 780 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 PYURFQ96I23 114 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 CSF3RQ99062 836 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 TMEM38AQ9H6F2 299 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 MAGIXQ9H6Y5 334 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 NTN4Q9HB63 628 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 STARD5Q9NSY2 213 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 FAF1Q9UNN5 650 aaPredicted RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 SLC22A7Q9Y694 548 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 AK5Q9Y6K8 562 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 FRYLO94915 3013 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 IGHV5-51A0A0C4DH38 117 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 RHPN2P1A8MT19 583 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 TMEM229AB2RXF0 380 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 UPK1AO00322 258 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 ACOX3O15254 700 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 NUDT21O43809 227 aaKnown RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 B3GALT2O43825 422 aa12.13□□□□□ -0.47
PVT1-203ENST00000513868 GALR3O60755 368 aaPredicted RBP12.13□□□□□ -0.47
PVT1-203ENST00000513868 ERAL1O75616 437 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms