RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ADPRHL2Q9NX46 363 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 MS4A12Q9NXJ0 267 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PDP2Q9P2J9 529 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SCOCQ9UIL1 159 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PSME2Q9UL46 239 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PADI4Q9UM07 663 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 OAZ3Q9UMX2 235 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PADI2Q9Y2J8 665 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SIT1Q9Y3P8 196 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SLC22A7Q9Y694 548 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SLCO1B1Q9Y6L6 691 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 CCDC88CQ9P219 2028 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ABCA7Q8IZY2 2146 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SCN3AQ9NY46 2000 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 RNF103-CHMP3A0A140T963 221 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 GSAPA4D1B5 854 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SAC3D1A6NKF1 404 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 TMEM229AB2RXF0 380 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 LMO7DNF2Z398 122 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 TXNDC9O14530 226 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 PPM1DO15297 605 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SUV39H1O43463 412 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CTSVO60911 334 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 AIFM1O95831 613 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CST1P01037 141 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 NUDT7P0C024 238 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ETFAP13804 333 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 CSNK2A2P19784 350 aaPredicted RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 EFNA1P20827 205 aaPredicted RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 NTSP30990 170 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SOX11P35716 441 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CRATP43155 626 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 LSSP48449 732 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ALDH9A1P49189 494 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 PRIM2P49643 509 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ANXA11P50995 505 aaKnown RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 ALDH3A2P51648 485 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CHN2P52757 468 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CRYBA2P53672 197 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 EPHA4P54764 986 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ARSFP54793 590 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 DSTNP60981 165 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CDK6Q00534 326 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 C1orf61Q13536 156 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SCARB2Q14108 478 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 DAG1Q14118 895 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 C16orf72Q14CZ0 275 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 NRF1Q16656 503 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SLC36A3Q495N2 470 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 IQCCQ4KMZ1 466 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CYBRD1Q53TN4 286 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZNF542PQ5EBM4 170 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 COX20Q5RI15 118 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 NIPAL1Q6NVV3 410 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ARMC6Q6NXE6 501 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 BHLHB9Q6PI77 547 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ABHD13Q7L211 337 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 C6orf120Q7Z4R8 191 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 TRIM73Q86UV7 250 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 C11orf74Q86VG3 221 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 RNF130Q86XS8 419 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 HIPK1Q86Z02 1210 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZDHHC21Q8IVQ6 265 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZC3H7AQ8IWR0 971 aaKnown RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 MMP21Q8N119 569 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CARFQ8N187 725 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ARL14Q8N4G2 192 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 MIPOL1Q8TD10 442 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 EXOSC8Q96B26 276 aaKnown RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 C7orf34Q96L11 122 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 C10orf90Q96M02 699 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZNF681Q96N22 645 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZNF285Q96NJ3 590 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 LRFN3Q9BTN0 628 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 DOHHQ9BU89 302 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 GLIPR2Q9H4G4 154 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ZNF696Q9H7X3 374 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CLK4Q9HAZ1 481 aaKnown RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 GIMAP4Q9NUV9 329 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 EVA1BQ9NVM1 165 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 SMPD3Q9NY59 655 aaPredicted RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 KCMF1Q9P0J7 381 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 NTMQ9P121 344 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 DLGAP2Q9P1A6 1054 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 IFT80Q9P2H3 777 aaPredicted RBP7.92□□□□□ -1.14
RNF4-220ENST00000513578 EPHA6Q9UF33 1036 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 UTS2RQ9UKP6 389 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ANGPT4Q9Y264 503 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 KLHL20Q9Y2M5 609 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ATG4BQ9Y4P1 393 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 CSNK1G3Q9Y6M4 447 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 NCOR1O75376 2440 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 ATRXP46100 2492 aa7.92□□□□□ -1.14
RNF4-220ENST00000513578 A0A0J9YVX5 310 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 G3V2T6 193 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 H0YGG7 62 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 EI24O14681 340 aa7.91□□□□□ -1.14
RNF4-220ENST00000513578 P2RX6O15547 441 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms