RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 OR10H2O60403 315 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 UGDHO60701 494 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 CTNSO60931 367 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PRKRAO75569 313 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ITGA10O75578 1167 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 SLC25A12O75746 678 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 GBAP04062 536 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 COL6A2P12110 1019 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 GP1BBP13224 206 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 COX7A2P14406 83 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 TAC1P20366 129 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PTX3P26022 381 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 TLX1P31314 330 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 BUD31P41223 144 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PIK3CBP42338 1070 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 SLCO1A2P46721 670 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 CYB561P49447 251 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 IFT88Q13099 833 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 E2F2Q14209 437 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ELAVL1Q15717 326 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 DEPDC1Q5TB30 811 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF468Q5VIY5 522 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 C1QL3Q5VWW1 255 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 H3F3CQ6NXT2 135 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 RPUSD3Q6P087 351 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 RPS27LQ71UM5 84 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 GALNTL5Q7Z4T8 443 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 UBE3DQ7Z6J8 389 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 MILR1Q7Z6M3 343 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 GPR180Q86V85 440 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 LCA5Q86VQ0 697 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 FJX1Q86VR8 437 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 NUDT13Q86X67 352 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM132CQ8N3T6 1108 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 TMEM156Q8N614 296 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 FAM98AQ8NCA5 519 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 NR4A3Q92570 626 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 DAZLQ92904 295 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 MTBPQ96DY7 904 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 VMP1Q96GC9 406 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 NSUN5Q96P11 429 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 DGAT2Q96PD7 388 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PSMG3-AS1Q96PY0 264 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 NPAS2Q99743 824 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 SLX1AQ9BQ83 275 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ROPN1BQ9BZX4 212 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 RPF2Q9H7B2 306 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 LIN28AQ9H9Z2 209 aaKnown RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ROPN1Q9HAT0 212 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PSMC3IPQ9P2W1 217 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 COPS7AQ9UBW8 275 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PHF11Q9UIL8 331 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 ERRFI1Q9UJM3 462 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 PCTPQ9UKL6 214 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 CACNA1DQ01668 2161 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 CPAMD8Q8IZJ3 1885 aa6.07□□□□□ -1.44
KDM3B-208ENST00000512928 USP9XQ93008 2570 aaPredicted RBP6.07□□□□□ -1.44
KDM3B-208ENST00000512928 DOCK10Q96BY6 2186 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SYNDIG1LA6NDD5 238 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 A8MT66 165 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 NPIPA5E9PKD4 350 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 H0YIV9 168 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 STX16-NPEPL1H3BU86 382 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 WWP2O00308 870 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 STX16O14662 325 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 FGF17O60258 216 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CDH16O75309 829 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 EEDO75530 441 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 OR2J2O76002 312 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 NEURL1O76050 574 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ZFAND5O76080 213 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SUPT7LO94864 414 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ETHE1O95571 254 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MLYCDO95822 493 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 OTCP00480 354 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SP1P08047 785 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SBK3P0C264 359 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 FAM58BPP0C7Q3 252 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 NR2F6P10588 404 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF24P17028 368 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 KRT15P19012 456 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MST1P26927 711 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 RFC3P40938 356 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 HLCSP50747 726 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SSR4P51571 173 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 CDH13P55290 713 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 HNRNPH2P55795 449 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PER3P56645 1201 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 MLF1P58340 268 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 GPR85P60893 370 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PLIN5Q00G26 463 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 TNFRSF17Q02223 184 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ALDH6A1Q02252 535 aaKnown RBP6.06□□□□□ -1.44
KDM3B-208ENST00000512928 FOLH1Q04609 750 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 SLC18A2Q05940 514 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 RBPJQ06330 500 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 PCDH1Q08174 1060 aa6.06□□□□□ -1.44
KDM3B-208ENST00000512928 ZNF844Q08AG5 666 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms