RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 A0A1W2PPC1 479 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM114B3SHH9 223 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 E5RI56 91 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PTGESO14684 152 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GNB5O14775 395 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTDSPLO15194 276 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 INSIG1O15503 277 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ADAM12O43184 909 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GRID2O43424 1007 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 UGDHO60701 494 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 NOS1APO75052 506 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ERN1O75460 977 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 S1PR4O95977 384 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 VIPP01282 170 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CALB1P05937 261 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 C1SP09871 688 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ALPIP09923 528 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CEACAM1P13688 526 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GLDCP23378 1020 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC6A2P23975 617 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 BDKRB2P30411 391 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRCPP42785 496 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC1A1P43005 524 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ALDH3B2P48448 385 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ARRB1P49407 418 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLK3P49761 638 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 STK19P49842 368 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SUOXP51687 545 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF135P52742 658 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ATP5J2P56134 94 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TFAMQ00059 246 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSF2Q03933 536 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ABHD18Q0P651 414 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MGAT2Q10469 447 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ILF2Q12905 390 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 NKG7Q16617 165 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 KNOP1Q1ED39 458 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 DPCR1Q3MIW9 517 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 DCAF4L1Q3SXM0 396 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 NRN1LQ496H8 165 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 LBHQ53QV2 105 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CCNYL2Q5T2Q4 361 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PYHIN1Q6K0P9 492 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRMT9Q6P2P2 845 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM81Q6P7N7 255 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRIM67Q6ZTA4 783 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC46A3Q7Z3Q1 461 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CBWD2Q8IUF1 395 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 AQP12AQ8IXF9 295 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CRIPAKQ8N1N5 446 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM47BQ8NA70 645 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MCOLN3Q8TDD5 553 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PTPMT1Q8WUK0 201 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ELMO1Q92556 727 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 AKAP1Q92667 903 aaKnown RBP eCLIP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TP53INP1Q96A56 240 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF689Q96CS4 500 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM176AQ96HP8 235 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 RANBP9Q96S59 729 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CENPKQ9BS16 269 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM43Q9BTV4 400 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TREX1Q9NSU2 369 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 CMTM6Q9NX76 183 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GDE1Q9NZC3 331 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 HCN3Q9P1Z3 774 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 UPB1Q9UBR1 384 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 NXF1Q9UBU9 619 aaKnown RBP4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAGEL2Q9UJ55 1249 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAN1B1Q9UKM7 699 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 PPP2R2CQ9Y2T4 447 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 B3GALT1Q9Y5Z6 326 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 TTC3P53804 2025 aa4.79□□□□□ -1.64
TRAPPC11-208ENST00000511955 GBF1Q92538 1859 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 SMIM28A0A1B0GU29 152 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 GNG14A0A1W2PPG7 69 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAGEA13PA6NCF6 341 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM191CA6NGB0 347 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 EIF4E1BA6NMX2 242 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF785A8K8V0 405 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 A8MUI8 341 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 LRRN3E7EW58 273 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MAN2B1O00754 1011 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PPM1DO15297 605 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLOCKO15516 846 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF623O75123 536 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TM7SF2O76062 418 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 B3GAT3O94766 335 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLEKP08567 350 aaPredicted RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANXA5P08758 320 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM191BP0C7N4 346 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 NQO1P15559 274 aaKnown RBP4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 HK1P19367 917 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 PROZP22891 400 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MMP8P22894 467 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR1E1P30953 314 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 MMP12P39900 470 aa4.78□□□□□ -1.64
TRAPPC11-208ENST00000511955 IST1P53990 364 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms