RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PLLPQ9Y342 182 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 PCDHGA10Q9Y5H3 936 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 PTGDR2Q9Y5Y4 395 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 ESPL1Q14674 2120 aa12.67□□□□□ -0.38
SNF8-206ENST00000509989 TMEM200CA6NKL6 621 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 PCDH17O14917 1159 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ZNF354AO60765 605 aaPredicted RBP12.66□□□□□ -0.38
SNF8-206ENST00000509989 WISP1O95388 367 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 AIFM1O95831 613 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 KLK1P06870 262 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 FAM58BPP0C7Q3 252 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ALDH3A1P30838 453 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 CCT5P48643 541 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 RAE1P78406 368 aaKnown RBP12.66□□□□□ -0.38
SNF8-206ENST00000509989 HMGCS1Q01581 520 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 TNFRSF17Q02223 184 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 DUSP2Q05923 314 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 TGM3Q08188 693 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 IFFO1Q0D2I5 559 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 IFT88Q13099 833 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ACER2Q5QJU3 275 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 IRAK1BP1Q5VVH5 260 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 FAM180BQ6P0A1 224 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 FRMD7Q6ZUT3 714 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ZNF227Q86WZ6 799 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ZNF595Q8IYB9 648 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 METTL4Q8N3J2 472 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ZCCHC7Q8N3Z6 543 aaKnown RBP12.66□□□□□ -0.38
SNF8-206ENST00000509989 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 SRFBP1Q8NEF9 429 aaKnown RBP12.66□□□□□ -0.38
SNF8-206ENST00000509989 OR1N1Q8NGS0 311 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 NCLNQ969V3 563 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 REPS1Q96D71 796 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 APIPQ96GX9 242 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 APOPT1Q96IL0 206 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 VPS50Q96JG6 964 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 FAM111AQ96PZ2 611 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 TAAR6Q96RI8 345 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ACPTQ9BZG2 426 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 ILKAPQ9H0C8 392 aaPredicted RBP12.66□□□□□ -0.38
SNF8-206ENST00000509989 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 PPCSQ9HAB8 311 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 MID1IP1Q9NPA3 183 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 SLAMF7Q9NQ25 335 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 OXSMQ9NWU1 459 aa12.66□□□□□ -0.38
SNF8-206ENST00000509989 RP1L1Q8IWN7 2480 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 HIVEP3Q5T1R4 2406 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 A0A088AWK7 358 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 TRBV11-1A0A0K0K1C0 115 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 DDAH2O95865 285 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 IFNA16P05015 189 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 ZNF10P21506 573 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 GNLYP22749 145 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 TNFSF10P50591 281 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 ARG2P78540 354 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 IGLV3-21P80748 117 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 PMP22Q01453 160 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 FOLH1Q04609 750 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 LCP2Q13094 533 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 MRPL49Q13405 166 aaKnown RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 MPP2Q14168 576 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 ZNF169Q14929 603 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 EXT1Q16394 746 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 KRT71Q3SY84 523 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 CLEC6AQ6EIG7 209 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 COMMD6Q7Z4G1 85 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 NUDT13Q86X67 352 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 SLC22A9Q8IVM8 553 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 IQCKQ8N0W5 287 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 C1orf52Q8N6N3 182 aaKnown RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 METTL6Q8TCB7 284 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 TCP10LQ8TDR4 215 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 ROPN1BQ9BZX4 212 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 ROGDIQ9GZN7 287 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 EPS8L2Q9H6S3 715 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 RPF2Q9H7B2 306 aaKnown RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 ROPN1Q9HAT0 212 aaPredicted RBP12.65□□□□□ -0.38
SNF8-206ENST00000509989 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 MAP10Q9P2G4 905 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 PPT2Q9UMR5 302 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 EXPH5Q8NEV8 1989 aa12.65□□□□□ -0.38
SNF8-206ENST00000509989 NCKAP5O14513 1909 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TMEM233B4DJY2 109 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TCP11X1B4DZS4 312 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 CLDN4O14493 209 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 TYROBPO43914 113 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 SEMA3DO95025 777 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 ESRRBO95718 433 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 CHRNGP07510 517 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 UQCRHP07919 91 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 ICAM2P13598 275 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 CD96P40200 585 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 DNAJB13P59910 316 aa12.64□□□□□ -0.39
SNF8-206ENST00000509989 PHEXP78562 749 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms