RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 TRPV3Q8NET8 790 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 C9orf43Q8TAL5 461 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 BRIX1Q8TDN6 353 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 DOK4Q8TEW6 326 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CCT6BQ92526 530 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ANKRD9Q96BM1 317 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TBC1D20Q96BZ9 403 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 C11orf24Q96F05 449 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 PKNOX2Q96KN3 472 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 FAM111AQ96PZ2 611 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 OR1F2PQ96R84 312 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 GATA5Q9BWX5 397 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ACPTQ9BZG2 426 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 SHCBP1LQ9BZQ2 653 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 BRINP2Q9C0B6 783 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 PITHD1Q9GZP4 211 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 SLC25A18Q9H1K4 315 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ADNPQ9H2P0 1102 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TUBB1Q9H4B7 451 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ACTR8Q9H981 624 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TUBD1Q9UJT1 453 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 DAPP1Q9UN19 280 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CDC14AQ9UNH5 594 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CCL27Q9Y4X3 112 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ASB4Q9Y574 426 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 PCDHGA9Q9Y5G4 932 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 NBASA2RRP1 2371 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 BAHCC1Q9P281 2608 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 A0A1W2PR48 441 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TMEM200CA6NKL6 621 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 MANBAO00462 879 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF354AO60765 605 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 B4GALT2O60909 372 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 SMIM24O75264 130 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 WISP2O76076 250 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 CLDN9O95484 217 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 AIFM1O95831 613 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 JUNP05412 331 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 HEXBP07686 556 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PRR35P0CG20 571 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 DHRS4L1P0CG22 281 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 C8orf89P0DMQ9 161 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PLA2G2AP14555 144 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 HOXB4P17483 251 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 KRT15P19012 456 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 CD33P20138 364 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 IMPDH1P20839 514 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 GSTM2P28161 218 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ADH6P28332 368 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ALDH3A1P30838 453 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PIK3CBP42338 1070 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 GIPRP48546 466 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 GPR143P51810 404 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 IGLV3-21P80748 117 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 HMGCS1Q01581 520 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TNFRSF17Q02223 184 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 OCA2Q04671 838 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 LCP2Q13094 533 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 DUSP8Q13202 625 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 LAPTM5Q13571 262 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF750Q32MQ0 723 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 SFT2D3Q587I9 215 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 CRB2Q5IJ48 1285 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PAGE2BQ5JRK9 111 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 DEPDC1Q5TB30 811 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 LIPJQ5W064 366 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 FRG2Q64ET8 278 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 SLC6A19Q695T7 634 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TCTN3Q6NUS6 607 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 METTL2BQ6P1Q9 378 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PAPD4Q6PIY7 484 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 SCIMPQ6UWF3 145 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 IGFL2Q6UWQ7 119 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 C16orf47Q6ZP98 133 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ABHD13Q7L211 337 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 CPEB2Q7Z5Q1 589 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 EXOC3L1Q86VI1 746 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 LCA5Q86VQ0 697 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 MYLK4Q86YV6 388 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 CDYL2Q8N8U2 506 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 ACOT4Q8N9L9 421 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 APCDD1LQ8NCL9 501 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 PLPP5Q8NEB5 264 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TTLQ8NG68 377 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 OR2T11Q8NH01 316 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 TCP10LQ8TDR4 215 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 MTFMTQ96DP5 389 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 APIPQ96GX9 242 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 FRG2BQ96QU4 278 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 SERINC2Q96SA4 455 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 YIPF2Q9BWQ6 316 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 MRPL1Q9BYD6 325 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 C5AR2Q9P296 337 aa6.74□□□□□ -1.33
TOPBP1-207ENST00000509162 GIMAP2Q9UG22 337 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms