RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ELP4Q96EB1 424 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PEX11GQ96HA9 241 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PANX3Q96QZ0 392 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AIFM2Q9BRQ8 373 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SUCNR1Q9BXA5 334 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SLC46A2Q9BY10 475 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SLITRK2Q9H156 845 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC19Q9H756 370 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF510Q9Y2H8 683 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ALOX15BO15296 676 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CSDE1O75534 798 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SSTR4P31391 388 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PTGFRP43088 359 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AP1S2P56377 157 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MGAT2Q10469 447 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GUK1Q16774 197 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PAN3Q58A45 887 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 XKR7Q5GH72 579 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MFSD12Q6NUT3 480 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 C3orf33Q6P1S2 294 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM139Q8IV31 216 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MFSD6LQ8IWD5 586 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TRAM1L1Q8N609 369 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FBXO36Q8NEA4 188 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR52E1Q8NGJ3 308 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TCP10LQ8TDR4 215 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF473Q8WTR7 871 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 RHBDF1Q96CC6 855 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MAP6Q96JE9 813 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 APOLD1Q96LR9 279 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 COQ10AQ96MF6 247 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MED15Q96RN5 788 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MCCC1Q96RQ3 725 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LGMNQ99538 433 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ST6GALNAC5Q9BVH7 336 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 IL22Q9GZX6 179 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FAM124BQ9H5Z6 455 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AAMDCQ9H7C9 122 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GJD2Q9UKL4 321 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 POLR2AP24928 1970 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FAM240BA0A1B0GVZ2 78 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MFSD2BA6NFX1 497 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GLTPD2A6NH11 291 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FAM25AB3EWG3 89 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FAM25CB3EWG5 89 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 FAM25GB3EWG6 89 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 RBAK-RBAKDNI3L0D1 243 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZNF197O14709 1029 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CLIC2O15247 247 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 RHBDL1O75783 438 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CNMDO75829 334 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 C22orf31O95567 290 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MT-CYBP00156 380 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ADRB2P07550 413 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ADH5P11766 374 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LYL1P12980 280 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 IL12BP29460 328 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 IFNA8P32881 189 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 EPHX2P34913 555 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CASP4P49662 377 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PRMT2P55345 433 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SOX4Q06945 474 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TRAF3Q13114 568 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PCLAFQ15004 111 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MEP1BQ16820 701 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ANXA2RQ3ZCQ2 193 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 MIIPQ5JXC2 388 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CLEC12AQ5QGZ9 265 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CATSPEREQ5SY80 951 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AGBL2Q5U5Z8 902 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LRRC31Q6UY01 552 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CHSY3Q70JA7 882 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PM20D2Q8IYS1 436 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SELENOHQ8IZQ5 122 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GABRG1Q8N1C3 465 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR9A1PQ8NGU1 263 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM143Q96AN5 459 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PPWD1Q96BP3 646 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PABPC5Q96DU9 382 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ACCSQ96QU6 501 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ALKBH7Q9BT30 221 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ACTRT3Q9BYD9 372 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OPN3Q9H1Y3 402 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CPVLQ9H3G5 476 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 KCNK12Q9HB15 430 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 AHSPQ9NZD4 102 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 EXTL2Q9UBQ6 330 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR14J1Q9UGF5 321 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 IGKV6D-21A0A0A0MT36 114 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 ZC3H12DA2A288 527 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 TMEM114B3SHH9 223 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 OR2J3O76001 311 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 LDOC1O95751 146 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 CHRM4P08173 479 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 NQO1P15559 274 aaKnown RBP3.74□□□□□ -1.81
NEDD4-209ENST00000508871 SMPD1P17405 629 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 GABRR2P28476 465 aa3.74□□□□□ -1.81
NEDD4-209ENST00000508871 EPHA2P29317 976 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms