RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 EPS15P42566 896 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 CRKLP46109 303 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 MFAP3P55082 362 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 C3AR1Q16581 482 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 KRBOX4Q5JUW0 171 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 VITQ6UXI7 678 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 KRT74Q7RTS7 529 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 TEX26Q8N6G2 289 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 MRPS27Q92552 414 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 RMDN1Q96DB5 314 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 TXLNGYQ9BZA5 131 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 AGTPBP1Q9UPW5 1226 aa3.99□□□□□ -1.77
TOPBP1-206ENST00000508524 TRPM7Q96QT4 1865 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 TJP1Q07157 1748 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 A8MXE2 369 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 PDHXO00330 501 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 SIGLEC5O15389 551 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 KIF5CO60282 957 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 TBX10O75333 385 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 RENP00797 406 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 ADORA3P0DMS8 318 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 GSK3BP49841 420 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 GMPSP49915 693 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 IL10RBQ08334 325 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 COG2Q14746 738 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 RALBP1Q15311 655 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 HYAL4Q2M3T9 481 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 C9orf66Q5T8R8 295 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 RNLSQ5VYX0 342 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 PPP1R21Q6ZMI0 780 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 ADCK1Q86TW2 530 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 GPD1LQ8N335 351 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 TAAR6Q96RI8 345 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 UBAC1Q9BSL1 405 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 NAA11Q9BSU3 229 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 FAM129AQ9BZQ8 928 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 FNDC4Q9H6D8 234 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 ZNF581Q9P0T4 197 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 SLC12A6Q9UHW9 1150 aa3.98□□□□□ -1.77
TOPBP1-206ENST00000508524 CDH23Q9H251 3354 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 ZNF831Q5JPB2 1677 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 NCAPD2Q15021 1401 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 SMG6Q86US8 1419 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 PAPPA2Q9BXP8 1791 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 IGHV3-16A0A0C4DH30 117 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 CCDC188H7C350 402 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 PSMA3P25788 255 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 RASA2Q15283 850 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 MFSD4BQ5TF39 518 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 SLC30A6Q6NXT4 461 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 RPUSD3Q6P087 351 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 BTNL8Q6UX41 500 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 BAIAP2L2Q6UXY1 529 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 GPR141Q7Z602 305 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 CCDC185Q8N715 623 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 OR4Q3Q8NH05 313 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 SLC26A7Q8TE54 656 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 HNRNPABQ99729 332 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 ALKBH7Q9BT30 221 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 PRO3102Q9H379 93 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 TMOD3Q9NYL9 352 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 RALGAPA1Q6GYQ0 2036 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 LAMB4A4D0S4 1761 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 BCORQ6W2J9 1755 aa3.97□□□□□ -1.77
TOPBP1-206ENST00000508524 TRAV18A0A075B6X5 111 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 SH3BGRLO75368 114 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 MT-ND2P03891 347 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 FEN1P39748 380 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 CDX1P47902 265 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 TRA2BP62995 288 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 ACY1Q03154 408 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 CAMK2DQ13557 499 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 GRB14Q14449 540 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 ZNF273Q14593 569 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 TCP11X2Q5H9J9 407 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 LRRC73Q5JTD7 316 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 AGAP7PQ5VUJ5 663 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 Q6ZVQ6 151 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 TRMT11Q7Z4G4 463 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 ZC3H3Q8IXZ2 948 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 KLHL30-AS1Q8NEE0 82 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 NABP1Q96AH0 204 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 CENPOQ9BU64 300 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 SATB2Q9UPW6 733 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 KLK4Q9Y5K2 254 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 A0A1W2PP64 1363 aa3.96□□□□□ -1.78
TOPBP1-206ENST00000508524 EDC4Q6P2E9 1401 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 TRGV8A0A0C4DH27 118 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 TRIM49BA6NDI0 452 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 A8MU76 341 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 TMEM150CB9EJG8 249 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 PRSS46E5RG02 174 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 E5RGE8 158 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 SPP1P10451 314 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 KNOP1Q1ED39 458 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 KRTAP13-3Q3SY46 172 aa3.95□□□□□ -1.78
TOPBP1-206ENST00000508524 C6orf136Q5SQH8 315 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms