RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 ITGA9Q13797 1035 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 EFTUD2Q15029 972 aaKnown RBP eCLIP5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 DUSP5Q16690 384 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 PARP10Q53GL7 1025 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 C15orf52Q6ZUT6 534 aaKnown RBP5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 PTAR1Q7Z6K3 402 aaPredicted RBP5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 HOGA1Q86XE5 327 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 TMEM126BQ8IUX1 230 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 PEX5LQ8IYB4 626 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 DCLK2Q8N568 766 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 RNASE8Q8TDE3 154 aaKnown RBP5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 CFAP36Q96G28 342 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 MAGED4Q96JG8 741 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 LRR1Q96L50 414 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 AKAP7Q9P0M2 348 aaPredicted RBP5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 SATB2Q9UPW6 733 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 ZNF510Q9Y2H8 683 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 RTL9Q8NET4 1388 aa5.8□□□□□ -1.48
COL6A4P1-204ENST00000508169 CCDC162PA2VCL2 907 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 HIP1O00291 1037 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 SLC1A7O00341 560 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 CLN5O75503 358 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 CEBPBP17676 345 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 CHMLP26374 656 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 NT5C2P49902 561 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 PAX9P55771 341 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 UCP2P55851 309 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 SNRPD1P62314 119 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 CSNK2BP67870 215 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 GUCY2DQ02846 1103 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 TRA2AQ13595 282 aaKnown RBP eCLIP5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 CDH18Q13634 790 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 HFEQ30201 348 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 Q6ZSR9 355 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 LAX1Q8IWV1 398 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 ZC3H3Q8IXZ2 948 aaKnown RBP5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 DDHD1Q8NEL9 900 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 OR6S1Q8NH40 331 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 MAPK15Q8TD08 544 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 SEPT8Q92599 483 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 GGHQ92820 318 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 WBP2Q969T9 261 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 GAL3ST4Q96RP7 486 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 MAGEF1Q9HAY2 307 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 POMT2Q9UKY4 750 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 RFX7Q2KHR2 1363 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 PALLDQ8WX93 1383 aa5.79□□□□□ -1.48
COL6A4P1-204ENST00000508169 TUBGCP6Q96RT7 1819 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 A0A087WZ39 114 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 HOXB6P17509 224 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 SOX3P41225 446 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 SLC1A3P43003 542 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 SMSP52788 366 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 XGP55808 180 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 TJP1Q07157 1748 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 LCP2Q13094 533 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 ITPK1Q13572 414 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 GRB14Q14449 540 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 SLC27A4Q6P1M0 643 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 FIP1L1Q6UN15 594 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 USP43Q70EL4 1123 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 TRMT11Q7Z4G4 463 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 SERPINA12Q8IW75 414 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 KLHDC8BQ8IXV7 354 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 THEM5Q8N1Q8 247 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 CHCHD4Q8N4Q1 142 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 CLEC1AQ8NC01 280 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 RNF149Q8NC42 400 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 MRGPRDQ8TDS7 321 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 DOT1LQ8TEK3 1739 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 FAM46BQ96A09 425 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 CCDC47Q96A33 483 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 GMPPAQ96IJ6 420 aaPredicted RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 C2orf48Q96LS8 159 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 IL12RB2Q99665 862 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 DDX50Q9BQ39 737 aaKnown RBP5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 THAP9Q9H5L6 903 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 CYP39A1Q9NYL5 469 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 MOSPD1Q9UJG1 213 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 APPL1Q9UKG1 709 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 ANGPTL3Q9Y5C1 460 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 ABCC12Q96J65 1359 aa5.78□□□□□ -1.48
COL6A4P1-204ENST00000508169 NUP98P52948 1817 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 A0A1W2PR80 420 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 TMEM129A0AVI4 362 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 ZNF732B4DXR9 585 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 MLNRO43193 412 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 VEGFDO43915 354 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 CTNNA2P26232 953 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 CLCN4P51793 760 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 TAB1Q15750 504 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 SGSM1Q2NKQ1 1148 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 CCDC57Q2TAC2 916 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 LRRC37A5PQ49AS3 106 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 KLHL22Q53GT1 634 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 ATP1A1-AS1Q5TC04 95 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 ZNF772Q68DY9 489 aaPredicted RBP5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 ETFRF1Q6IPR1 90 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 PWWP2BQ6NUJ5 590 aa5.77□□□□□ -1.49
COL6A4P1-204ENST00000508169 C17orf107Q6ZR85 190 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms