RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	TERF2	Q15554	542 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	OR1C1	Q15619	314 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ELAVL1	Q15717	326 aa	Known RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF766	Q5HY98	468 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SPINK14	Q6IE38	97 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SH2D5	Q6ZV89	423 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	NUDT13	Q86X67	352 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	C4orf33	Q8N1A6	199 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	TMEM132C	Q8N3T6	1108 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CCNYL1	Q8N7R7	359 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CDYL2	Q8N8U2	506 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CCDC63	Q8NA47	563 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	APCDD1L	Q8NCL9	501 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PRR7	Q8TB68	274 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	FAR1	Q8WVX9	515 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	VMP1	Q96GC9	406 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SIGLEC12	Q96PQ1	595 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	HBEGF	Q99075	208 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MRPL1	Q9BYD6	325 aa	Known RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	C12orf65	Q9H3J6	166 aa	Known RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	DDX31	Q9H8H2	851 aa	Known RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	KLHL1	Q9NR64	748 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	LYAR	Q9NX58	379 aa	Known RBP	13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	VTI1B	Q9UEU0	232 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF225	Q9UK10	706 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	EMCN	Q9ULC0	261 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SNX6	Q9UNH7	406 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SLC12A4	Q9UP95	1085 aa		13.2	□□□□□ -0.3
CCHCR1-222	ENST00000507459	UBR5	O95071	2799 aa	Predicted RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459		A0A0A6YYD5	115 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	BLACE	A4D250	179 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ANKUB1	A6NFN9	424 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	GLOD5	A6NK44	160 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	WASHC1	A8K0Z3	465 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	C17orf105	B2RV13	164 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	COPE	O14579	308 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PROM1	O43490	865 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SEMA3D	O95025	777 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CBX6	O95503	412 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	KLK1	P06870	262 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	KRT4	P19013	534 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MLF1	P58340	268 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	FOLH1	Q04609	750 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	IFFO1	Q0D2I5	559 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SERTAD2	Q14140	314 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	UBAP2L	Q14157	1087 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ERCC6L	Q2NKX8	1250 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	RPUSD3	Q6P087	351 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	BCORP1	Q8N888	145 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	DAZL	Q92904	295 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	UCN3	Q969E3	161 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PPWD1	Q96BP3	646 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	TAAR6	Q96RI8	345 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	BARD1	Q99728	777 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	HES7	Q9BYE0	225 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	OR8D2	Q9GZM6	311 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	LIN28A	Q9H9Z2	209 aa	Known RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	OLAH	Q9NV23	265 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	AHSP	Q9NZD4	102 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	LRFN1	Q9P244	771 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	TRPS1	Q9UHF7	1281 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF223	Q9UK11	482 aa	Predicted RBP	13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	GRID1	Q9ULK0	1009 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PPT2	Q9UMR5	302 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ASB4	Q9Y574	426 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SVIL	O95425	2214 aa		13.19	□□□□□ -0.3
CCHCR1-222	ENST00000507459		A0A1W2PR48	441 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ARHGAP10	A1A4S6	786 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SYNDIG1L	A6NDD5	238 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459		G3V2L1	256 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PRKN	O60260	465 aa	Predicted RBP	13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZFAND5	O76080	213 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	RASAL1	O95294	804 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MLYCD	O95822	493 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	PROC	P04070	461 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	NR2F6	P10588	404 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CD46	P15529	392 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	HMOX2	P30519	316 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CRHR1	P34998	444 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CYB561	P49447	251 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	GPR143	P51810	404 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	RASA2	Q15283	850 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CCDC153	Q494R4	210 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	CCNYL2	Q5T2Q4	361 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	C10orf62	Q5T681	223 aa	Predicted RBP	13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	FHL5	Q5TD97	284 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MRM1	Q6IN84	353 aa	Known RBP	13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	WDR93	Q6P2C0	686 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZYG11A	Q6WRX3	759 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	GPRIN3	Q6ZVF9	776 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	LGI4	Q8N135	537 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	FAM26E	Q8N5C1	309 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	HORMAD2	Q8N7B1	307 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	ZNF321P	Q8N8H1	164 aa		13.18	□□□□□ -0.3
CCHCR1-222	ENST00000507459	MYRIP	Q8NFW9	859 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms