RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 HSDL2Q6YN16 418 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 GPALPP1Q8IXQ4 340 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 ZZZ3Q8IYH5 903 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 EID3Q8N140 333 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 MORN4Q8NDC4 146 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 GRK7Q8WTQ7 553 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 UCN3Q969E3 161 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 SERINC2Q96SA4 455 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 GPATCH1Q9BRR8 931 aaKnown RBP12.34□□□□□ -0.43
DDX41-206ENST00000506965 NAT9Q9BTE0 207 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 MS4A8Q9BY19 250 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 IL1RL2Q9HB29 575 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 CTNNAL1Q9UBT7 734 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
DDX41-206ENST00000506965 OR14I1A6ND48 311 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 USP27XA6NNY8 438 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 E7ESA3 106 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 SCELO95171 688 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 IFNA16P05015 189 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ATP5A1P25705 553 aaKnown RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 HNMTP50135 292 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 MGAT5Q09328 741 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ASPHQ12797 758 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 DLG1Q12959 904 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 MYBPHQ13203 477 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 PRAMEF20Q5VT98 475 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 B3GNT6Q6ZMB0 384 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ACAD11Q709F0 780 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ADAMTSL2Q86TH1 951 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 SLC22A16Q86VW1 577 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 TMEM132CQ8N3T6 1108 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 ACOT4Q8N9L9 421 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 FAR2Q96K12 515 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 SH3GL2Q99962 352 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 CCDC77Q9BR77 488 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 SLC6A15Q9H2J7 730 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 ZNF703Q9H7S9 590 aaPredicted RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 PTBP2Q9UKA9 531 aaKnown RBP12.33□□□□□ -0.44
DDX41-206ENST00000506965 CLCA3PQ9Y6N3 262 aa12.33□□□□□ -0.44
DDX41-206ENST00000506965 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 FOXO6A8MYZ6 492 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 SAP18O00422 153 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 SEC31AO94979 1220 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 CD1DP15813 335 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 ZFP36L2P47974 494 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 MRPS25P82663 173 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 MORF4L2Q15014 288 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 C1orf185Q5T7R7 199 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 NDUFAF5Q5TEU4 345 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 TRIM40Q6P9F5 258 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 MMP21Q8N119 569 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 FBXO36Q8NEA4 188 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 OR10Q1Q8NGQ4 319 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 OR8K3Q8NH51 312 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 OR14A16Q8NHC5 309 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 FOXC2Q99958 501 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 DERL2Q9GZP9 239 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 RHOJQ9H4E5 214 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 EHD1Q9H4M9 534 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 IGSF5Q9NSI5 407 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 DNAJC11Q9NVH1 559 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 DNAJB12Q9NXW2 375 aaKnown RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 GPRC5BQ9NZH0 403 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 CRIM1Q9NZV1 1036 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 CHCHD2Q9Y6H1 151 aaPredicted RBP12.32□□□□□ -0.44
DDX41-206ENST00000506965 PCNX3Q9H6A9 2034 aa12.32□□□□□ -0.44
DDX41-206ENST00000506965 ANKDD1BA6NHY2 528 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 ACOT7O00154 380 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 BCKDKO14874 412 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 PROM1O43490 865 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 SUSD5O60279 629 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 CD99P14209 185 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 RPL21P46778 160 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 PDIA2Q13087 525 aaKnown RBP12.31□□□□□ -0.44
DDX41-206ENST00000506965 CEBPEQ15744 281 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 MPEG1Q2M385 716 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 FNDC7Q5VTL7 733 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 BICRALQ6AI39 1079 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 RGS9BPQ6ZS82 235 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 GK5Q6ZS86 529 aa12.31□□□□□ -0.44
DDX41-206ENST00000506965 CAPN12Q6ZSI9 719 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms