RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 C1orf52Q8N6N3 182 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 OR6Y1Q8NGX8 325 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 M1APQ8TC57 530 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 UCN3Q969E3 161 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 PKNOX2Q96KN3 472 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 MFRPQ9BY79 579 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 MMP25Q9NPA2 562 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 PNO1Q9NRX1 252 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 MS4A12Q9NXJ0 267 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 VPS29Q9UBQ0 182 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 ADAM29Q9UKF5 820 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 CSAG2Q9Y5P2 127 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 ACTL7BQ9Y614 415 aa17.07■□□□□ 0.32
PDLIM7-216ENST00000506537 SERTM1A2A2V5 107 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 BLACEA4D250 179 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 WASHC1A8K0Z3 465 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 H3BQF6 201 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 KLHL41O60662 606 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 DPM1O60762 260 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 MYO1DO94832 1006 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 NR2F6P10588 404 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 IGLV3-21P80748 117 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 ZNF33BQ06732 778 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 ASPHQ12797 758 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 MFAP5Q13361 173 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CRB2Q5IJ48 1285 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CES4AQ5XG92 561 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CLEC6AQ6EIG7 209 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 LINC00696Q6ZRV3 163 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CUZD1Q86UP6 607 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 OR4N5Q8IXE1 308 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 KIF2BQ8N4N8 673 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 GBP7Q8N8V2 638 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CHTF18Q8WVB6 975 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 CNDP1Q96KN2 507 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 NPAS2Q99743 824 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 TRMOQ9BU70 441 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 RPF2Q9H7B2 306 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 ADAP2Q9NPF8 381 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 AHSPQ9NZD4 102 aa17.06■□□□□ 0.32
PDLIM7-216ENST00000506537 GLOD5A6NK44 160 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 NPHS1O60500 1241 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 MYZAPP0CAP1 466 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 DHRS4L1P0CG22 281 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 BUD31P41223 144 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 SERPINB4P48594 390 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 RAE1P78406 368 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 TERF2Q15554 542 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 CCNYL2Q5T2Q4 361 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 SLC6A19Q695T7 634 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 ISLR2Q6UXK2 745 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 PAGE2Q7Z2X7 111 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 HPS6Q86YV9 775 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 TEX19Q8NA77 164 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 Q8NA96 180 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 ELP5Q8TE02 316 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 APIPQ96GX9 242 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 ALOXE3Q9BYJ1 711 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 ANAPC2Q9UJX6 822 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 HEMK1Q9Y5R4 338 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
PDLIM7-216ENST00000506537 PRRC2CQ9Y520 2896 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 ARHGAP10A1A4S6 786 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 TMEM233B4DJY2 109 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 TM9SF1O15321 606 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 CRCPO75575 148 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 UROSP10746 265 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 H2AFXP16104 143 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 MAPK12P53778 367 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 AP2B1P63010 937 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 FOLH1Q04609 750 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 STX4Q12846 297 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 ELAVL1Q15717 326 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 ARL13AQ5H913 290 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 FCRLBQ6BAA4 426 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 H3F3CQ6NXT2 135 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 PRICKLE2Q7Z3G6 844 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 MMP21Q8N119 569 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 APCDD1LQ8NCL9 501 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 TANKQ92844 425 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 TLCD1Q96CP7 247 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 C11orf24Q96F05 449 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 EPN3Q9H201 632 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 KCNK13Q9HB14 408 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 NMRK1Q9NWW6 199 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 LUZP4Q9P127 313 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 VTI1BQ9UEU0 232 aa17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 ZNF223Q9UK11 482 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 PPIEQ9UNP9 301 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-216ENST00000506537 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 A0A1W2PS29 197 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 AZIN1O14977 448 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 PGRMC2O15173 223 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 SLC28A2O43868 658 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 MAN1A2O60476 641 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 SORBS2O94875 1100 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 IFNA16P05015 189 aa17.03■□□□□ 0.32
PDLIM7-216ENST00000506537 TLX1P31314 330 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms