RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 BRF2Q9HAW0 419 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 MLXIPLQ9NP71 852 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 MID1IP1Q9NPA3 183 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 PRTFDC1Q9NRG1 225 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ARGLU1Q9NWB6 273 aaPredicted RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 VPS29Q9UBQ0 182 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 PHF11Q9UIL8 331 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 MMACHCQ9Y4U1 282 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 HEMK1Q9Y5R4 338 aaPredicted RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 AHCTF1Q8WYP5 2266 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ATMQ13315 3056 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 OR2W5A6NFC9 320 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 B8ZZF3 427 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 C4orf51C9J302 202 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 RTCAO00442 366 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 CYR61O00622 381 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 PLPP1O14494 284 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 DPM1O60762 260 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 GUCY1B2O75343 617 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SEC24DO94855 1032 aaPredicted RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 SEMA3DO95025 777 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SCELO95171 688 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SERPINA7P05543 415 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 KLK1P06870 262 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 UQCRHP07919 91 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 FAM58BPP0C7Q3 252 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 HSD3B1P14060 373 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 CPN2P22792 545 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 HSD3B2P26439 372 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 CERS1P27544 350 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 PPP2R1BP30154 601 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 BUD31P41223 144 aaPredicted RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 BTG2P78543 158 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 STX4Q12846 297 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 KLRB1Q12918 225 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 CSTF3Q12996 717 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 RAPSNQ13702 412 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SERTAD2Q14140 314 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 PCOLCEQ15113 449 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SFT2D3Q587I9 215 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 VWA5B1Q5TIE3 1220 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 FRMD7Q6ZUT3 714 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 GPR180Q86V85 440 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 NUDT13Q86X67 352 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 NUDCD3Q8IVD9 361 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 C10orf107Q8IVU9 208 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 GBP7Q8N8V2 638 aaPredicted RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 FAM47BQ8NA70 645 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 M1APQ8TC57 530 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 TANKQ92844 425 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 PGM2Q96G03 612 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 LMF1Q96S06 567 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 TRMOQ9BU70 441 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 NUDT9Q9BW91 350 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 C12orf65Q9H3J6 166 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 GSTO2Q9H4Y5 243 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 ZNF552Q9H707 407 aaPredicted RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 RPF2Q9H7B2 306 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 DDX31Q9H8H2 851 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 WDR41Q9HAD4 459 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 EML4Q9HC35 981 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 LYARQ9NX58 379 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 KCMF1Q9P0J7 381 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 TEKT2Q9UIF3 430 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 ADAM29Q9UKF5 820 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 FBXW2Q9UKT8 454 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SLC12A4Q9UP95 1085 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 TP53TG5Q9Y2B4 290 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 ACTL7BQ9Y614 415 aa6.82□□□□□ -1.32
GYPB-206ENST00000506516 SNRNP200O75643 2136 aaKnown RBP6.82□□□□□ -1.32
GYPB-206ENST00000506516 IGHV3-20A0A0C4DH32 117 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 A0A1B0GTL3 188 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 TCRBV16S1A1N1A0A5B0 115 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 MASP2O00187 686 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 MANBAO00462 879 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 TM9SF1O15321 606 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 PROM1O43490 865 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 DYRK3O43781 588 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 TYROBPO43914 113 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 NPHS1O60500 1241 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 ZWINTO95229 277 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 ETHE1O95571 254 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 CHEK2O96017 543 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 PRB1P04280 392 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 IFNA16P05015 189 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 BPGMP07738 259 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 PRR35P0CG20 571 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 UROSP10746 265 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 SPTBP11277 2137 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 NEFHP12036 1026 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 CREB1P16220 341 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 TNNI3P19429 210 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 MAOAP21397 527 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 ALDH3A1P30838 453 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 BSGP35613 385 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 SERPINB5P36952 375 aa6.81□□□□□ -1.32
GYPB-206ENST00000506516 EFNA3P52797 238 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms