RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KIRREL3Q8IZU9 778 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 MARVELD2Q8N4S9 558 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 FAM89BQ8N5H3 189 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 KBTBD3Q8NAB2 608 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 LEMD2Q8NC56 503 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 KBTBD8Q8NFY9 601 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR4A16Q8NH70 328 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 WBP2Q969T9 261 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 LMLNQ96KR4 655 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF577Q9BSK1 485 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 ABCG4Q9H172 646 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 HIPK2Q9H2X6 1198 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PIGVQ9NUD9 493 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PANK4Q9NVE7 773 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TBC1D13Q9NVG8 400 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR6C2Q9NZP2 312 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TAAR2Q9P1P5 351 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TEKT2Q9UIF3 430 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 FBXL4Q9UKA2 621 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRDM4Q9UKN5 801 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 ELF5Q9UKW6 265 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 CLCA3PQ9Y6N3 262 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLX4Q8IY92 1834 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 COL4A1P02462 1669 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 RIC1Q4ADV7 1423 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SIPA1L3O60292 1781 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ADAMTSL1Q8N6G6 1762 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 RGSL1A5PLK6 1076 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 A8MVM7 634 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SNURFLB1AK76 121 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ACOT8O14734 319 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CPLX1O14810 134 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 KLF11O14901 512 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC22A2O15244 555 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 INSIG1O15503 277 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SYT7O43581 403 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR6B1O95007 311 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 GUCA1CO95843 209 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TGFAP01135 160 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 MT-ND2P03891 347 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CHRNGP07510 517 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SFTPBP07988 381 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NUDT17P0C025 328 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRKAR1AP10644 381 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SKILP12757 684 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 PAX1P15863 534 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 AMD1P17707 334 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 EIF2S2P20042 333 aaKnown RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 RPA1P27694 616 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 MARCKSP29966 332 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CDKN1AP38936 164 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 DCTP40126 519 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC1A3P43003 542 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CAMLGP49069 296 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 THBS3P49746 956 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SSTP61278 116 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCZ1BP86790 482 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCZ1P86791 482 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ITGA9Q13797 1035 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 P2RY6Q15077 328 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 STX1AQ16623 288 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TAF1BQ53T94 588 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 C12orf60Q5U649 245 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF324BQ6AW86 544 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC27A4Q6P1M0 643 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ISLR2Q6UXK2 745 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 GDPD4Q6W3E5 623 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 KIF6Q6ZMV9 814 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 C15orf52Q6ZUT6 534 aaKnown RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 C9orf139Q6ZV77 190 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 FCRLAQ7L513 359 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC16A9Q7RTY1 509 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 HSCBQ8IWL3 235 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 LMNTD2Q8IXW0 634 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPC2Q8N158 579 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ARL6IP6Q8N6S5 226 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NIPA2Q8N8Q9 360 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 LMO3Q8TAP4 145 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCDC110Q8TBZ0 833 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SPATA18Q8TC71 538 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 GANCQ8TET4 914 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TM9SF4Q92544 642 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NXPE2Q96DL1 559 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ALG14Q96F25 216 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SAMD8Q96LT4 415 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 CFAP53Q96M91 514 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 LPAR4Q99677 370 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 SPAG8Q99932 426 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 UBAC1Q9BSL1 405 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 NTMT1Q9BV86 223 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATG10Q9H0Y0 220 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRPV6Q9H1D0 765 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 MTIF3Q9H2K0 278 aaKnown RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 RWDD1Q9H446 243 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 EGLN3Q9H6Z9 239 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 MARCH7Q9H992 704 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 VIPAS39Q9H9C1 493 aa2.88□□□□□ -1.95
TRAPPC11-205ENST00000506426 LIN28AQ9H9Z2 209 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms