RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 MMP16P51512 607 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF136P52737 540 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CDKN2DP55273 166 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 RNF4P78317 190 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CDK16Q00536 496 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 STX4Q12846 297 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 DAZAP2Q15038 168 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SIX1Q15475 284 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CCNG2Q16589 344 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 HYAL4Q2M3T9 481 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 TUSC1Q2TAM9 212 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FBXL19-AS1Q494R0 122 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 HSP90AA5PQ58FG0 334 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 NXPE4Q6UWF7 544 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 C4orf22Q6V702 233 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CAND1Q86VP6 1230 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 THOC6Q86W42 341 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 KLHDC8AQ8IYD2 350 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FAM13CQ8NE31 585 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 OR5L2Q8NGL0 311 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SLC2A12Q8TD20 617 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CALML6Q8TD86 181 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 DOK4Q8TEW6 326 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ATL1Q8WXF7 558 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF592Q92610 1267 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FBXL8Q96CD0 374 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 HSPBAP1Q96EW2 488 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SMIM10Q96HG1 83 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 COX4I2Q96KJ9 171 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SGCZQ96LD1 299 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 Q96MF0 132 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 TRIB1Q96RU8 372 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FAM167BQ9BTA0 163 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 COPS7BQ9H9Q2 264 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CLK4Q9HAZ1 481 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 BEX4Q9NWD9 120 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 TAS2R13Q9NYV9 303 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SLC17A6Q9P2U8 582 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 COPS7AQ9UBW8 275 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FOXD3Q9UJU5 478 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 CAMK2AQ9UQM7 478 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 MPDZO75970 2070 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF469Q96JG9 3925 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 A0A088AWK7 358 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 NPEPPSL1A6NEC2 478 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TRIM64A6NGJ6 449 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TRIM64BA6NI03 449 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SDR42E2A6NKP2 422 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SMPD2O60906 423 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 LDB3O75112 727 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TRAPPC6AO75865 159 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF10P21506 573 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 GDF1P27539 372 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 CPA2P48052 419 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 AP1S2P56377 157 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 IL2P60568 153 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TIAL1Q01085 375 aaKnown RBP eCLIP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 DUSP8Q13202 625 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TOMM20Q15388 145 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 C18orf21Q32NC0 220 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SLC22A10Q63ZE4 541 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ADNP2Q6IQ32 1131 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TRIM40Q6P9F5 258 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 LUZP2Q86TE4 346 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 CXorf67Q86X51 503 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 LACC1Q8IV20 430 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 LMNTD2Q8IXW0 634 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF595Q8IYB9 648 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 TXLNBQ8N3L3 684 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 GPATCH11Q8N954 259 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 MORN4Q8NDC4 146 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 OR10G3Q8NGC4 313 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 OR14A16Q8NHC5 309 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 NEIL3Q8TAT5 605 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SLC22A8Q8TCC7 542 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 PTPMT1Q8WUK0 201 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 MS4A6EQ96DS6 147 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 PERPQ96FX8 193 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SERPINB12Q96P63 405 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 GAL3ST4Q96RP7 486 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 BAG1Q99933 345 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 EGFL8Q99944 293 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 DOHHQ9BU89 302 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 NPLQ9BXD5 320 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ALOXE3Q9BYJ1 711 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 PELI2Q9HAT8 420 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ZFP64Q9NPA5 681 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 ADAM21Q9UKJ8 722 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 IKZF3Q9UKT9 509 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 GUCA1BQ9UMX6 200 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 SLC22A14Q9Y267 594 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 KCNE2Q9Y6J6 123 aa6.34□□□□□ -1.39
NPIPB3-203ENST00000504841 CSPG4Q6UVK1 2322 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 KIAA1549Q9HCM3 1950 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 RTTNQ86VV8 2226 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 NCKAP5O14513 1909 aa6.33□□□□□ -1.4
NPIPB3-203ENST00000504841 SH3D21A4FU49 640 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms