RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SCUBE1Q8IWY4 988 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 DDIASQ8IXT1 998 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 FAM47BQ8NA70 645 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TMEM52Q8NDY8 209 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 C7orf57Q8NEG2 295 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 OR2T11Q8NH01 316 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 CKAP2Q8WWK9 683 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 METTL21AQ8WXB1 218 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TANKQ92844 425 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TM4SF18Q96CE8 201 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 PTCHD1Q96NR3 888 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 CSF3RQ99062 836 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 LRTM1Q9HBL6 345 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 PRTFDC1Q9NRG1 225 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 PNPOQ9NVS9 261 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 C1orf109Q9NX04 203 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 P4HTMQ9NXG6 502 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 EML6Q6ZMW3 1958 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 IGKV3D-11A0A0A0MRZ8 115 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 SYNDIG1LA6NDD5 238 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 SLCO1B7G3V0H7 640 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 LSM1O15116 133 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 PCDH7O60245 1069 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 SEC22BO75396 215 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 SKAP2O75563 359 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 MYO1DO94832 1006 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C8orf89P0DMQ9 161 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 ACPPP15309 386 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 HNRNPFP52597 415 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP1A4Q13733 1029 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 NR6A1Q15406 480 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 NSDHLQ15738 373 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 COL28A1Q2UY09 1125 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C18orf63Q68DL7 685 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 FAAH2Q6GMR7 532 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 NOXRED1Q6NXP6 359 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C19orf48Q6RUI8 117 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C19orf60Q96EN9 201 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 CRELD1Q96HD1 420 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 FCRL1Q96LA6 429 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 PPP3R2Q96LZ3 170 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C3orf30Q96M34 536 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C7orf26Q96N11 449 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 ZNF700Q9H0M5 742 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 RPF2Q9H7B2 306 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 WDR41Q9HAD4 459 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 NECTIN3Q9NQS3 549 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 RIC8BQ9NVN3 520 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 VTI1BQ9UEU0 232 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 C19orf25Q9UFG5 118 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 MAN2B2Q9Y2E5 1009 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 CLDN16Q9Y5I7 305 aa11.18□□□□□ -0.62
PDLIM5-208ENST00000504489 GNG14A0A1W2PPG7 69 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 TCRBV16S1A1N1A0A5B0 115 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 HDAC3O15379 428 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 AIFM1O95831 613 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 ITGB2P05107 769 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 ANXA4P09525 319 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 NR2F6P10588 404 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 MAOAP21397 527 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 PPP2R1BP30154 601 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 HK2P52789 917 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 RRADP55042 308 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 SLC13A2Q13183 592 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 BIKQ13323 160 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 PDCD2Q16342 344 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 SMU1Q2TAY7 513 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 DEFB109BQ30KR1 87 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP6AP1LQ52LC2 224 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 RFTN2Q52LD8 501 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 NDUFAF5Q5TEU4 345 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 CPEB2Q7Z5Q1 589 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 ANKRD37Q7Z713 158 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 APLFQ8IW19 511 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 TMEM102Q8N9M5 508 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 C16orf78Q8WTQ4 265 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 TSLPQ969D9 159 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 ANKRD9Q96BM1 317 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 C8orf44Q96CB5 159 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 FER1L6-AS2Q96M78 137 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 TEX10Q9NXF1 929 aaPredicted RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 WBP11Q9Y2W2 641 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 PCDHA9Q9Y5H5 950 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 KCNMB2Q9Y691 235 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 EXPH5Q8NEV8 1989 aa11.17□□□□□ -0.62
PDLIM5-208ENST00000504489 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP6AP2A0A1C7CYW4 349 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 C1orf226A1L170 272 aa11.16□□□□□ -0.62
PDLIM5-208ENST00000504489 TGFBR3LH3BV60 316 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms