RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 A0A1B0GUH1 482 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SAP18O00422 153 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 PRKNO60260 465 aaPredicted RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 LDB3O75112 727 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SH3BGRLO75368 114 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 ZFAND5O76080 213 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SEMA3DO95025 777 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 CLDN9O95484 217 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 CPN2P22792 545 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 PTX3P26022 381 aaPredicted RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 BSGP35613 385 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 HLCSP50747 726 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 RAP1GDS1P52306 607 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 HNRNPH2P55795 449 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 KCNK10P57789 538 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 TNFRSF17Q02223 184 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 OC90Q02509 493 aaPredicted RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 STX4Q12846 297 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 CPSF6Q16630 551 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■■■■■ 27.5
HOXC6-203ENST00000504315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 MYLK4Q86YV6 388 aaPredicted RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SIAH3Q8IW03 269 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 EIF1ADQ8N9N8 165 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 FAM98AQ8NCA5 519 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 UHMK1Q8TAS1 419 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 THAP3Q8WTV1 239 aaPredicted RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 RELTQ969Z4 430 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 PHF21BQ96EK2 531 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SORBS1Q9BX66 1292 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 NOL11Q9H8H0 719 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 DDX31Q9H8H2 851 aaKnown RBP12.73□□□□□ -0.37
HOXC6-203ENST00000504315 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 PHF11Q9UIL8 331 aa12.73□□□□□ -0.37
HOXC6-203ENST00000504315 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 TMPRSS11DO60235 418 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 FGF17O60258 216 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 SMIM24O75264 130 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ITGA10O75578 1167 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 WISP2O76076 250 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ETHE1O95571 254 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 CLDN1O95832 211 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 FAM153BP0C7A2 387 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 CCNG1P51959 295 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 PER3P56645 1201 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 SLAMF1Q13291 335 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 BIKQ13323 160 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ZRSR2Q15696 482 aaKnown RBP12.72□□□□□ -0.37
HOXC6-203ENST00000504315 FAM153CQ494X1 144 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
HOXC6-203ENST00000504315 GPR180Q86V85 440 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 LCA5Q86VQ0 697 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 GPALPP1Q8IXQ4 340 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ZNF721Q8TF20 911 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 TANKQ92844 425 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 TRIM44Q96DX7 344 aaPredicted RBP12.72□□□□□ -0.37
HOXC6-203ENST00000504315 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 GPR137Q96N19 417 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 NSUN5Q96P11 429 aaKnown RBP12.72□□□□□ -0.37
HOXC6-203ENST00000504315 CDK15Q96Q40 435 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 CCDC77Q9BR77 488 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 MYOTQ9UBF9 498 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 FBXW2Q9UKT8 454 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 YARS2Q9Y2Z4 477 aaKnown RBP12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ATG4BQ9Y4P1 393 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 ASB4Q9Y574 426 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 CLCA3PQ9Y6N3 262 aa12.72□□□□□ -0.37
HOXC6-203ENST00000504315 NOTCH2Q04721 2471 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 A8MT66 165 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 C17orf105B2RV13 164 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 LRRTM2O43300 516 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 PROM1O43490 865 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 EEDO75530 441 aaKnown RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 UNC5CO95185 931 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 IFNA16P05015 189 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 BUD31P41223 144 aaPredicted RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 STT3AP46977 705 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 NEK2P51955 445 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 ALDH6A1Q02252 535 aaKnown RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 SRSF11Q05519 484 aaKnown RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 MAPKAPK3Q16644 382 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 KRTCAP3Q53RY4 240 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 C18orf63Q68DL7 685 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 Q6ZPB1 254 aaPredicted RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 LRRN4CLQ8ND94 238 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 MYRIPQ8NFW9 859 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 ACMSDQ8TDX5 336 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 ZNF483Q8TF39 744 aaPredicted RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 MZB1Q8WU39 189 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 TMEM125Q96AQ2 219 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 SERPINI1Q99574 410 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 RPF2Q9H7B2 306 aaKnown RBP12.71□□□□□ -0.37
HOXC6-203ENST00000504315 L2HGDHQ9H9P8 463 aa12.71□□□□□ -0.37
HOXC6-203ENST00000504315 LYARQ9NX58 379 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms