RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PSMB5P28074 263 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 MAGEA2P43356 314 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 VEZF1Q14119 521 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 MLF2Q15773 248 aaPredicted RBP11.04□□□□□ -0.64
USP46-204ENST00000503060 CYP27C1Q4G0S4 372 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 TCTE1Q5JU00 501 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 PATL1Q86TB9 770 aaKnown RBP11.04□□□□□ -0.64
USP46-204ENST00000503060 OFCC1Q8IZS5 231 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 ZNF786Q8N393 782 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 RAB42Q8N4Z0 105 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 LINC01555Q8NAE3 123 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 OR4K1Q8NGD4 311 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 OR5K1Q8NHB7 308 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 MTERF3Q96E29 417 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
USP46-204ENST00000503060 MS4A8Q9BY19 250 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 USE1Q9NZ43 259 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 AHSPQ9NZD4 102 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 SPASTQ9UBP0 616 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 RPS6KA6Q9UK32 745 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
USP46-204ENST00000503060 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ANKDD1BA6NHY2 528 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 PRR19A6NJB7 356 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ANHXE9PGG2 379 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 MAGEB3O15480 346 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SEMA3DO95025 777 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 C6orf47O95873 294 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ABCB1P08183 1280 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 IL3P08700 152 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 NUDT7P0C024 238 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ALOX12P18054 663 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 MAT2AP31153 395 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 HBA1P69905 142 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 C19orf57Q0VDD7 668 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SPIDRQ14159 915 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 RGNQ15493 299 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 MPEG1Q2M385 716 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ZIK1Q3SY52 487 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 DEPDC1Q5TB30 811 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 GPR139Q6DWJ6 353 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 RAB11FIP2Q7L804 512 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 ZDHHC21Q8IVQ6 265 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 RDH12Q96NR8 316 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 CAMK1GQ96NX5 476 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 GDF15Q99988 308 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 APOOQ9BUR5 198 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 NT5DC2Q9H857 520 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SMURF2Q9HAU4 748 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 FZD3Q9NPG1 666 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 CLDND1Q9NY35 253 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 IFT80Q9P2H3 777 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 MOSPD1Q9UJG1 213 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 NUP214P35658 2090 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 CEP290O15078 2479 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3DA0A087WVF3 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3IA0A087WXS9 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3EA0A087X179 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3KA0A087X1G2 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3FA6NER0 549 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3LB9A6J9 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 H7BY64 318 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SMPD2O60906 423 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3HP0C7X1 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SERPINB1P30740 379 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 DCTP40126 519 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 VBP1P61758 197 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 CYP4F2P78329 520 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 PPP2R2BQ00005 443 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP46-204ENST00000503060 KHDRBS2Q5VWX1 349 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3GQ6DHY5 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3CQ6IPX1 549 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 SPESP1Q6UW49 350 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 RBM44Q6ZP01 1051 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 CBLL1Q75N03 491 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 EIF3MQ7L2H7 374 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 TMEM179BQ7Z7N9 219 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 GALNT10Q86SR1 603 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TBC1D3Q8IZP1 549 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 HS3ST5Q8IZT8 346 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 C1orf216Q8TAB5 229 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 CIDECQ96AQ7 238 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 PRAP1Q96NZ9 151 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 UCK1Q9HA47 277 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 TM9SF3Q9HD45 589 aa11.03□□□□□ -0.64
USP46-204ENST00000503060 IMP3Q9NV31 184 aaKnown RBP11.03□□□□□ -0.64
USP46-204ENST00000503060 L7N2F9 121 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 PLPP1O14494 284 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 AP3D1O14617 1153 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 SEMG1P04279 462 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 NTRK1P04629 796 aa11.02□□□□□ -0.65
USP46-204ENST00000503060 PRKACAP17612 351 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms