RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 GJC1P36383 396 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RPS5P46782 204 aaKnown RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 STC1P52823 247 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 AP2S1P53680 142 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 TPTEP56180 551 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 DNAJB13P59910 316 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CXCR4P61073 352 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PPP1CAP62136 330 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CSNK2BP67870 215 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ARG2P78540 354 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TAGLNQ01995 201 aaKnown RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 ACY1Q03154 408 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PRKCDQ05655 676 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RBPJQ06330 500 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.92□□□□□ -1.62
HTT-202ENST00000502820 FADDQ13158 208 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 SELENBP1Q13228 472 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PMS2P3Q13401 168 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PLCL1Q15111 1095 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 DUSP7Q16829 419 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.92□□□□□ -1.62
HTT-202ENST00000502820 PYCR3Q53H96 274 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CRB2Q5IJ48 1285 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CEP78Q5JTW2 689 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 FAM209AQ5JX71 171 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 DCAF10Q5QP82 559 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 HENMT1Q5T8I9 393 aaKnown RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 C1orf189Q5VU69 101 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 LRRC66Q68CR7 880 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 OGFOD2Q6N063 350 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TMEM214Q6NUQ4 689 aaKnown RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 C8orf82Q6P1X6 216 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 ADAMTSL4Q6UY14 1074 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ZYG11AQ6WRX3 759 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 C3P1Q6ZMU1 363 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 UNC5AQ6ZN44 842 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RFLNAQ6ZTI6 216 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TMEM26Q6ZUK4 368 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ZNF767PQ75MW2 155 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TAS2R42Q7RTR8 314 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 MAVSQ7Z434 540 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RFX6Q8HWS3 928 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PHYKPLQ8IUZ5 450 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 C8orf59Q8N0T1 100 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 SVOPLQ8N434 492 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.92□□□□□ -1.62
HTT-202ENST00000502820 DNAAF3Q8N9W5 541 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 SLC38A9Q8NBW4 561 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 KCTD6Q8NC69 237 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 SETD9Q8NE22 299 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TRPV3Q8NET8 790 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 OR7A2PQ8NGA2 310 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ADAMTS17Q8TE56 1095 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 LRRN4Q8WUT4 740 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 MUL1Q969V5 352 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TMIGD2Q96BF3 282 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 SDCCAG3Q96C92 435 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 AP2M1Q96CW1 435 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RCN3Q96D15 328 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TMCO6Q96DC7 493 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CXorf40BQ96DE9 158 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 COX14Q96I36 57 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ZNF514Q96K75 400 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 SMIM14Q96QK8 99 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 NDC1Q9BTX1 674 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CCDC32Q9BV29 185 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 NLNQ9BYT8 704 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ABCG8Q9H221 673 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 NEK6Q9HC98 313 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ATP13A2Q9NQ11 1180 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 RAB6BQ9NRW1 208 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 C20orf96Q9NUD7 363 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 RBM22Q9NW64 420 aaKnown RBP eCLIP4.92□□□□□ -1.62
HTT-202ENST00000502820 SMOXQ9NWM0 555 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 TMEM181Q9P2C4 612 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 ABCD2Q9UBJ2 740 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 TINAGQ9UJW2 476 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 SLC17A4Q9Y2C5 497 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PLEKHA6Q9Y2H5 1048 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PADI2Q9Y2J8 665 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 NDUFAF1Q9Y375 327 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 PTRH2Q9Y3E5 179 aaKnown RBP4.92□□□□□ -1.62
HTT-202ENST00000502820 SCN8AQ9UQD0 1980 aa4.92□□□□□ -1.62
HTT-202ENST00000502820 APCP25054 2843 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 TRPM6Q9BX84 2022 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 KIR2DS5A0A0G2JLQ3 304 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 A0A0G2JNG1 304 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 LOC100653049A0A140TA62 436 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 CLDN24A6NM45 220 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 LOC110117498-PIK3R3F6TDL0 507 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 KIR2DS3K7RE56 304 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 M0R3G1 203 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 UBXN8O00124 270 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 KCNK1O00180 336 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 APOL1O14791 398 aa4.91□□□□□ -1.62
HTT-202ENST00000502820 SMAD7O15105 426 aaKnown RBP4.91□□□□□ -1.62
HTT-202ENST00000502820 SHOXO15266 292 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms