RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GRID2O43424 1007 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 SCGB2A1O75556 95 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 CDC123O75794 336 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRT36O76013 467 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 EML2O95834 649 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 PROS1P07225 676 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 APRTP07741 180 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 TPBGLP0DKB5 382 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ERVK-10P10266 1014 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 RALAP11233 206 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 MDH1P40925 334 aaKnown RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 SOX3P41225 446 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ALDH3B1P43353 468 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 TEAD2Q15562 447 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR1C1Q15619 314 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM106AQ4KMX7 169 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 GPAT3Q53EU6 434 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 MPPE1Q53F39 396 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ATP1A1-AS1Q5TC04 95 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 CAPN13Q6MZZ7 669 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 BNIPLQ7Z465 357 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF540Q8NDQ6 660 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 GATAD1Q8WUU5 269 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNRF4Q8WWF5 429 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ERGIC2Q96RQ1 377 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC26A1Q9H2B4 701 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 S100A14Q9HCY8 104 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF334Q9HCZ1 680 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 HPS4Q9NQG7 708 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 CGNQ9P2M7 1197 aaKnown RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 IL20RAQ9UHF4 553 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 MRTO4Q9UKD2 239 aaKnown RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 NPC1L1Q9UHC9 1359 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 TROQ12816 1431 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 POGZQ7Z3K3 1410 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 MAGI2Q86UL8 1455 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 KIDINS220Q9ULH0 1771 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 CLDN3O15551 220 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 AP2A2O94973 939 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 SYNGR4O95473 234 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 UMODP07911 640 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 HIST1H2AGP0C0S8 130 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 NCF1P14598 390 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 GNSP15586 552 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 FEN1P39748 380 aaKnown RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 MAGEA4P43358 317 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 NLRP11P59045 1033 aaKnown RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 BTG1P62324 171 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 CSNK2BP67870 215 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 HSPA14Q0VDF9 509 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 PDZK1IP1Q13113 114 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 PDIA5Q14554 519 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 RBBP5Q15291 538 aaKnown RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZRSR1Q15695 479 aaKnown RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 C3AR1Q16581 482 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 WSCD2Q2TBF2 565 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 AFTPHQ6ULP2 937 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM159AQ6UWV7 190 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 LACC1Q8IV20 430 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 LRRC17Q8N6Y2 441 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR5AP2Q8NGF4 316 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 OR4D10Q8NGI6 311 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 GPR148Q8TDV2 347 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ARHGAP45Q92619 1136 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 FCGR1BQ92637 280 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 HIST1H2ACQ93077 130 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF524Q96C55 264 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 VPS39Q96JC1 886 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 C2orf48Q96LS8 159 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 CBWD1Q9BRT8 395 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 WACQ9BTA9 647 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 THUMPD2Q9BTF0 503 aaKnown RBP4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 EGLN1Q9GZT9 426 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 NACA2Q9H009 215 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 MMP28Q9H239 520 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 COQ10BQ9H8M1 238 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ZNF556Q9HAH1 456 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 VPS54Q9P1Q0 977 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ENTPD4Q9Y227 616 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 C2CD2Q9Y426 696 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 U3KQV3 271 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 KDM5CP41229 1560 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 NEDD4P46934 1319 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 RNF123Q5XPI4 1314 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ABCA6Q8N139 1617 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 PREX1Q8TCU6 1659 aa4.64□□□□□ -1.67
HMGB1P3-201ENST00000502802 ATP10AO60312 1499 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 STRCQ7RTU9 1775 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ARHGAP5Q13017 1502 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 ARHGEF12Q9NZN5 1544 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 DIP2CQ9Y2E4 1556 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 YJEFN3A6XGL0 299 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 TCP10L2B9ZVM9 353 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 LMO7DNF2Z398 122 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 KHDRBS3O75525 346 aaKnown RBP4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 FGF19O95750 216 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 AK1P00568 194 aa4.63□□□□□ -1.67
HMGB1P3-201ENST00000502802 FAM200BP0CF97 657 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms