RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 CXXC4Q9H2H0 198 aa2□□□□□ -2.09
TRBVA-201ENST00000498804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2□□□□□ -2.09
TRBVA-201ENST00000498804 GMEB2Q9UKD1 530 aa2□□□□□ -2.09
TRBVA-201ENST00000498804 GPR132Q9UNW8 380 aa2□□□□□ -2.09
TRBVA-201ENST00000498804 ETV7Q9Y603 341 aa2□□□□□ -2.09
TRBVA-201ENST00000498804 TRAV34A0A0B4J273 112 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 KLF18A0A0U1RQI7 1052 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 C2orf92A0A1B0GVN3 265 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 TSPY2A6NKD2 308 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 H7C0S8 307 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 HDAC3O15379 428 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 DKC1O60832 514 aaKnown RBP eCLIP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 CSO75390 466 aaKnown RBP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 SIX3O95343 332 aaPredicted RBP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 PIGRP01833 764 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 FOSL2P15408 326 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 BRCC3P46736 316 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 FHITP49789 147 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 SLC17A1Q14916 467 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 HERC4Q5GLZ8 1057 aaPredicted RBP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 LYPLAL1Q5VWZ2 237 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 REP15Q6BDI9 236 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 DMKNQ6E0U4 476 aaPredicted RBP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 DCLRE1AQ6PJP8 1040 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 ZNF730Q6ZMV8 503 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 ZNF600Q6ZNG1 722 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 FAM47EQ6ZV65 393 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 TIGD4Q8IY51 512 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 PCNPQ8WW12 178 aaKnown RBP1.99□□□□□ -2.09
TRBVA-201ENST00000498804 MR1Q95460 341 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 PNPLA2Q96AD5 504 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 ERP27Q96DN0 273 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 RAB3CQ96E17 227 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 ATG101Q9BSB4 218 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 MED17Q9NVC6 651 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 IL17CQ9P0M4 197 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 SENP1Q9P0U3 644 aa1.99□□□□□ -2.09
TRBVA-201ENST00000498804 ARHGEF37A1IGU5 675 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ILVBLA1L0T0 632 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SH3PXD2BA1X283 911 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ZSCAN5CA6NGD5 496 aaPredicted RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 E7ENQ6 273 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 LRRTM2O43300 516 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SCO2O43819 266 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 RPN1P04843 607 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 VIMP08670 466 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SKILP12757 684 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 IFNAR1P17181 557 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 GLRA1P23415 457 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 GP5P40197 560 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 MAGEB1P43366 347 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 MTIF2P46199 727 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 RPL27P61353 136 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 CETN1Q12798 172 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 KCTD2Q14681 263 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 DCAF12Q5T6F0 453 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 RFPL4BQ6ZWI9 263 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ANKRD46Q86W74 232 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 TMEM99Q8N816 258 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 CLEC1AQ8NC01 280 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 CHDHQ8NE62 594 aaPredicted RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 DNASE1L2Q92874 299 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 RBM18Q96H35 190 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 PCED1BQ96HM7 432 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SDHCQ99643 169 aaPredicted RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 BAG1Q99933 345 aaPredicted RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 FERMT1Q9BQL6 677 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ZNF559Q9BR84 538 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 DEFB126Q9BYW3 111 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 LSG1Q9H089 658 aaKnown RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ZBP1Q9H171 429 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 NT5DC2Q9H857 520 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 S100A14Q9HCY8 104 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 UBE2TQ9NPD8 197 aaPredicted RBP1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SH3GLB2Q9NR46 395 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 PLSCR3Q9NRY6 295 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 SWAP70Q9UH65 585 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 RSPH14Q9UHP6 348 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 PSORS1C1Q9UIG5 152 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 NTNG1Q9Y2I2 539 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 OR1A2Q9Y585 309 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 POMT1Q9Y6A1 747 aa1.98□□□□□ -2.09
TRBVA-201ENST00000498804 ATP6AP2A0A1C7CYW4 349 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 YDJCA8MPS7 323 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 ZNF487B1APH4 448 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 NEDD8-MDP1E9PL57 170 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 DUSP11O75319 330 aaKnown RBP1.97□□□□□ -2.09
TRBVA-201ENST00000498804 PDGFBP01127 241 aaPredicted RBP1.97□□□□□ -2.09
TRBVA-201ENST00000498804 RLN1P04808 185 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 APOA4P06727 396 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 LYNP07948 512 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 CCND3P30281 292 aaPredicted RBP1.97□□□□□ -2.09
TRBVA-201ENST00000498804 TNFRSF4P43489 277 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 NPBWR1P48145 328 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 HMGCS2P54868 508 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 KRTAP10-1P60331 282 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 ERVPABLB-1P60509 514 aa1.97□□□□□ -2.09
TRBVA-201ENST00000498804 ABRAXAS2Q15018 415 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms