RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 LDAHQ9H6V9 325 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 LYRM4Q9HD34 91 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 PRDM7Q9NQW5 492 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 PNPLA3Q9NST1 481 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 CD274Q9NZQ7 290 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 TNFRSF10DQ9UBN6 386 aa11.15□□□□□ -0.62
CNOT4-211ENST00000498534 PHF3Q92576 2039 aaKnown RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ZFHX3Q15911 3703 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 MYOCOSA0A1B0GUC4 107 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 FAM47E-STBD1D6RA91 191 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 G3V3Y1 287 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TAPBPO15533 448 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 SUSD5O60279 629 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ZWINTO95229 277 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 IGHG3P01860 377 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 S100BP04271 92 aaPredicted RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ZFP36L2P47974 494 aaKnown RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 HSPA7P48741 367 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 MAN2A2P49641 1150 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ATP6V0D1P61421 351 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 IRF8Q02556 426 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 PDK4Q16654 411 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 AP5B1Q2VPB7 878 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TMEM35AQ53FP2 167 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 WLSQ5T9L3 541 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 CHSY3Q70JA7 882 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TRILQ7L0X0 811 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 VN1R5Q7Z5H4 357 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 SPATA6LQ8N4H0 392 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 RPRMLQ8N4K4 120 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ACOT4Q8N9L9 421 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 SLC2A12Q8TD20 617 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 CDKL2Q92772 493 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 UBE2E3Q969T4 207 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 SARAFQ96BY9 339 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 WDR34Q96EX3 536 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 RBM18Q96H35 190 aaKnown RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 SCYL1Q96KG9 808 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 CAPZA3Q96KX2 299 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 CSF3RQ99062 836 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 KRT12Q99456 494 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 WDR83Q9BRX9 315 aaKnown RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TTYH2Q9BSA4 534 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 TRIM31Q9BZY9 425 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 EXO5Q9H790 373 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 ALKBH4Q9NXW9 302 aa11.14□□□□□ -0.63
CNOT4-211ENST00000498534 MTO1Q9Y2Z2 717 aaKnown RBP11.14□□□□□ -0.63
CNOT4-211ENST00000498534 A0A1B0GVC2 190 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ATP6AP2A0A1C7CYW4 349 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 AQP7O14520 342 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 KLK8O60259 260 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 CCNT2O60583 730 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 WDR1O75083 606 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 LDB3O75112 727 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ATP6AP2O75787 350 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 TBX6O95947 436 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 GLI4P10075 376 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 STMN1P16949 149 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ATP5A1P25705 553 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 MSH2P43246 934 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 MAGEA5P43359 124 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 NR0B1P51843 470 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ART1P52961 327 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 TBL3Q12788 808 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 TBCCQ15814 346 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 MPEG1Q2M385 716 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 HYAL4Q2M3T9 481 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 PIGGQ5H8A4 983 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 SLC22A10Q63ZE4 541 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ZBED8Q8IZ13 594 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 PYROXD1Q8WU10 500 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ESAMQ96AP7 390 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 SENP5Q96HI0 755 aaPredicted RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 DGAT2Q96PD7 388 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 TRMT1Q9NXH9 659 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.13□□□□□ -0.63
CNOT4-211ENST00000498534 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
CNOT4-211ENST00000498534 TRGV5A0A0B4J1U4 118 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 E7ESA3 106 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CCDC188H7C350 402 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 HCN1O60741 890 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 TGFB1P01137 390 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 GABRA1P14867 456 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CPN2P22792 545 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 TLX1P31314 330 aaPredicted RBP11.12□□□□□ -0.63
CNOT4-211ENST00000498534 CASP2P42575 452 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 PAFAH1B1P43034 410 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 DNASE1L1P49184 302 aa11.12□□□□□ -0.63
CNOT4-211ENST00000498534 ID2Q02363 134 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms