RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PSD4Q8NDX1 1056 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 SLC44A1Q8WWI5 657 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 WDR34Q96EX3 536 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 SERINC2Q96SA4 455 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 SPOCK3Q9BQ16 436 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 WWOXQ9NZC7 414 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 GPRC5BQ9NZH0 403 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 YARS2Q9Y2Z4 477 aaKnown RBP17.21■□□□□ 0.35
PRKCB-209ENST00000498058 ANKDD1BA6NHY2 528 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 POC1B-GALNT4F8VUJ3 575 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 G3V3Y1 287 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 WWP2O00308 870 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 RTCAO00442 366 aaKnown RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 CLDN4O14493 209 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 KRT38O76015 456 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 CNTFP26441 200 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 SSTR2P30874 369 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 SOX3P41225 446 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 MTTPP55157 894 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 POU4F1Q01851 419 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 ZNF750Q32MQ0 723 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 UBAP2Q5T6F2 1119 aaKnown RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 TRIM40Q6P9F5 258 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 IL20RBQ6UXL0 311 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 MEX3BQ6ZN04 569 aaKnown RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 GPSM1Q86YR5 675 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 CA5BP1Q8WTZ4 195 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 C14orf79Q96F83 325 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 RASL10BQ96S79 203 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 PAFAH2Q99487 392 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 MAPKAP1Q9BPZ7 522 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 ALOXE3Q9BYJ1 711 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 UCK2Q9BZX2 261 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 ROPN1BQ9BZX4 212 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 EHD1Q9H4M9 534 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 ROPN1Q9HAT0 212 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 NPDC1Q9NQX5 325 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 MYOTQ9UBF9 498 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 ZNF180Q9UJW8 692 aa17.2■□□□□ 0.34
PRKCB-209ENST00000498058 PTBP2Q9UKA9 531 aaKnown RBP17.2■□□□□ 0.34
PRKCB-209ENST00000498058 FAM166BA8MTA8 275 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 CTNSO60931 367 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 LDB3O75112 727 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 GSTM2P28161 218 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 HK2P52789 917 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 ID2Q02363 134 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 TFF3Q07654 80 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 BMPR2Q13873 1038 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 EFTUD2Q15029 972 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 ELAVL1Q15717 326 aaKnown RBP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 LRIG3Q6UXM1 1119 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 HDXQ7Z353 690 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 SNX31Q8N9S9 440 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 OR2M7Q8NG81 312 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 MRRFQ96E11 262 aaKnown RBP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 PTCD3Q96EY7 689 aaKnown RBP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 SEC16BQ96JE7 1060 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 GPR22Q99680 433 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 RBBP8Q99708 897 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 PITHD1Q9GZP4 211 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 TIMMDC1Q9NPL8 285 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 PSMC3IPQ9P2W1 217 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-209ENST00000498058 VTI1BQ9UEU0 232 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 ERVK-11Q9UQG0 969 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 RNF6Q9Y252 685 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 LIPGQ9Y5X9 500 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 MED13LQ71F56 2210 aa17.19■□□□□ 0.34
PRKCB-209ENST00000498058 NCKAP5O14513 1909 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 NKX2-6A6NCS4 301 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 A8MVJ9 347 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 CLGNO14967 610 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 SH3BGRLO75368 114 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 STK16O75716 305 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 ETHE1O95571 254 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 IFNA16P05015 189 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 IGFBP2P18065 325 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 SLC12A2P55011 1212 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 TLE4Q04727 773 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 DLG1Q12959 904 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 E2F2Q14209 437 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 CASP8Q14790 479 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 TESK1Q15569 626 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 SULT1C3Q6IMI6 304 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 CCDC71Q8IV32 467 aaPredicted RBP17.18■□□□□ 0.34
PRKCB-209ENST00000498058 TCAIMQ8N3R3 496 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 RIBC1Q8N443 379 aaPredicted RBP17.18■□□□□ 0.34
PRKCB-209ENST00000498058 PDPRQ8NCN5 879 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 ZNF473Q8WTR7 871 aaKnown RBP17.18■□□□□ 0.34
PRKCB-209ENST00000498058 ASB15Q8WXK1 588 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 ANKRD9Q96BM1 317 aaPredicted RBP17.18■□□□□ 0.34
PRKCB-209ENST00000498058 TSPAN17Q96FV3 270 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 SCYL1Q96KG9 808 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 UBXN10Q96LJ8 280 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 CAPS2Q9BXY5 557 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 MS4A8Q9BY19 250 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 ZDHHC11Q9H8X9 412 aa17.18■□□□□ 0.34
PRKCB-209ENST00000498058 HPF1Q9NWY4 346 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms