RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 DPY19L1Q2PZI1 675 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 ZNF385CQ66K41 422 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 C8orf82Q6P1X6 216 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 COX15Q7KZN9 410 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 R3HCC1LQ7Z5L2 792 aaKnown RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 OR4N5Q8IXE1 308 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 DPP10Q8N608 796 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 CNRIP1Q96F85 164 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 LIN37Q96GY3 246 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 ZNF764Q96H86 408 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 FAIM2Q9BWQ8 316 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 TRIM8Q9BZR9 551 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 BHLHE41Q9C0J9 482 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 AKIRIN1Q9H9L7 192 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 EFCAB1Q9HAE3 211 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 EHD3Q9NZN3 535 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 UTS2RQ9UKP6 389 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 PCDHB3Q9Y5E6 796 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 PTGER1P34995 402 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 EFNA3P52797 238 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 PCBP4P57723 403 aaKnown RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 CAPRIN1Q14444 709 aaKnown RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 MAPKAPK3Q16644 382 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 MMEL1Q495T6 779 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 COQ5Q5HYK3 327 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 YOD1Q5VVQ6 348 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 LCN10Q6JVE6 187 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 RAB11FIP2Q7L804 512 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 OR51Q1Q8NH59 317 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 STARD8Q92502 1023 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 MVB12AQ96EY5 273 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 ZNF681Q96N22 645 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 RPF2Q9H7B2 306 aaKnown RBP22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 CLDN16Q9Y5I7 305 aa22.85■■□□□ 1.25
TNFRSF4-203ENST00000497869 DYTNA2CJ06 578 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 SLC30A4O14863 429 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 GUCY1B2O75343 617 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 C8orf89P0DMQ9 161 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 RORAP35398 523 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 FOXL2P58012 376 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 DNAJC14Q6Y2X3 702 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 PRPF18Q99633 342 aaKnown RBP22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 PAIP1Q9H074 479 aaKnown RBP22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 MS4A12Q9NXJ0 267 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 SLC39A1Q9NY26 324 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 SLC25A37Q9NYZ2 338 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 MAN2B2Q9Y2E5 1009 aa22.84■■□□□ 1.25
TNFRSF4-203ENST00000497869 MYOCOSA0A1B0GUC4 107 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 FAM149AA5PLN7 773 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 TGFBR3LH3BV60 316 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 ATP5HO75947 161 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 CEACAM1P13688 526 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 PTPN4P29074 926 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 RPL3P39023 403 aaKnown RBP22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 BUD31P41223 144 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 FRKP42685 505 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 NOVA1P51513 510 aaKnown RBP22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 ID2Q02363 134 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 DSG2Q14126 1118 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 SUN3Q8TAQ9 357 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 STRADBQ9C0K7 418 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 LRMDAQ9H2I8 198 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 SLC35C2Q9NQQ7 365 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 FAM120CQ9NX05 1096 aaKnown RBP22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 SRPK3Q9UPE1 567 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 MAPRE3Q9UPY8 281 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 PCDHGA7Q9Y5G6 932 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 B3GALT1Q9Y5Z6 326 aa22.83■■□□□ 1.25
TNFRSF4-203ENST00000497869 FER1L5A0AVI2 2057 aa22.83■■□□□ 1.24
TNFRSF4-203ENST00000497869 TRBV5-3A0A0A0MS03 114 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 PRSS51A0A1B0GVH4 220 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 FGF17O60258 216 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 LDB3O75112 727 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 CDC123O75794 336 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 C6orf47O95873 294 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 GSNP06396 782 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ACTN3Q08043 901 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 BPHLQ86WA6 291 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ANKRD9Q96BM1 317 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 CCDC115Q96NT0 180 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 DEPDC7Q96QD5 511 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 GPATCH1Q9BRR8 931 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 BTBD10Q9BSF8 475 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ZNF304Q9HCX3 659 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 VAPAQ9P0L0 249 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 RNASET2O00584 256 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ERAL1O75616 437 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 RNH1P13489 461 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 FEN1P39748 380 aaKnown RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 XCR1P46094 333 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 HBA1P69905 142 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 TARDBPQ13148 414 aaKnown RBP eCLIP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 NFYCQ13952 458 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 NIPAL1Q6NVV3 410 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 PRMT9Q6P2P2 845 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 MSANTD1Q6ZTZ1 278 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 ZNF551Q7Z340 670 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 CLEC4FQ8N1N0 589 aa22.82■■□□□ 1.24
TNFRSF4-203ENST00000497869 KLHL29Q96CT2 875 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms