RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ARPC5O15511 151 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PJA2O43164 708 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC28A2O43868 658 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF4O60810 478 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF11O60813 436 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 AVILO75366 819 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SOX30O94993 753 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR6B1O95007 311 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SEC24AO95486 1093 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HEXAP06865 529 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CSF1RP07333 972 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ITGA5P08648 1049 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM191BP0C7N4 346 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PSKH1P11801 424 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF26P17031 533 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CNR1P21554 472 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MSR1P21757 451 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HNRNPH3P31942 346 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 THBS4P35443 961 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CSKP41240 450 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 RPS5P46782 204 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FASLGP48023 281 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MEOX1P50221 254 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ADPRHP54922 357 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LGALS4P56470 323 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PER3P56645 1201 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 GNG11P61952 73 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NUTF2P61970 127 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS9P82933 396 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SP3Q02447 781 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ROM1Q03395 351 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CACNG1Q06432 222 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SIGLEC14Q08ET2 396 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TFDP2Q14188 446 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CSHL1Q14406 222 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MTF1Q14872 753 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PDK3Q15120 406 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC1A5Q15758 541 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 RNF212Q495C1 297 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF667Q5HYK9 610 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PLEKHS1Q5SXH7 462 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF5Q5TYX0 476 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF6Q5VXH4 476 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ATG9BQ674R7 924 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TYW3Q6IPR3 259 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 EFCAB12Q6NXP0 572 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM199XQ6PEV8 388 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SPESP1Q6UW49 350 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LRRN1Q6UXK5 716 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM151BQ6UXP7 276 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CCNI2Q6ZMN8 369 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LRRC74BQ6ZQY2 392 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 RNF44Q7L0R7 432 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ASRGL1Q7L266 308 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SYT13Q7L8C5 426 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 KANSL1Q7Z3B3 1105 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SYVN1Q86TM6 617 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 VRK2Q86Y07 508 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ADGRF4Q8IZF3 695 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ABRAQ8N0Z2 381 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SYNE4Q8N205 404 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 LRRC18Q8N456 261 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CCNYQ8ND76 341 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ELP5Q8TE02 316 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 C3orf49Q96BT1 292 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SAT2Q96F10 170 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM210BQ96KR6 192 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 OR5M11Q96RB7 305 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ORAI2Q96SN7 254 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PRRT1Q99946 306 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PKP2Q99959 881 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MED18Q9BUE0 208 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC2A11Q9BYW1 496 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 WDR11Q9BZH6 1224 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HIPK2Q9H2X6 1198 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 DPEP2Q9H4A9 486 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SMURF2Q9HAU4 748 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZFP14Q9HCL3 533 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TM7SF3Q9NS93 570 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NDUFAF4Q9P032 175 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ARPP21Q9UBL0 812 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF225Q9UK10 706 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CA5BQ9Y2D0 317 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PADI2Q9Y2J8 665 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 WIF1Q9Y5W5 379 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 PCM1Q15154 2024 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CPS1P31327 1500 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MAP3K1Q13233 1512 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 EDDM13A0A1B0GTR0 161 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 C9orf170A2RU37 121 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 GRID2IPA4D2P6 1211 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 A6NIZ1 184 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 ASB14A6NK59 587 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 OR52A4PA6NMU1 304 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 A8MUA0 341 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 KCNU1A8MYU2 1149 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 F8WDY8 70 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC33A1O00400 549 aaPredicted RBP2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PHYHO14832 338 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 KLK10O43240 276 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms