RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 COL9A1P20849 921 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 CD247P20963 164 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 BCL6P41182 706 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 STT3AP46977 705 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 MLC1Q15049 377 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 NPTX1Q15818 432 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 ZIC1Q15915 447 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 RPE65Q16518 533 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 CYP27C1Q4G0S4 372 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 RPS26P11Q5JNZ5 115 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 MTSS1LQ765P7 747 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 C6orf120Q7Z4R8 191 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF605Q86T29 641 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-220ENST00000496711 SVOPQ8N4V2 548 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PSMA8Q8TAA3 256 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 SLC38A5Q8WUX1 472 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 RORBQ92753 470 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TMEM19Q96HH6 336 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PSD2Q9BQI7 771 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 DPH7Q9BTV6 452 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 FAIM2Q9BWQ8 316 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 AICDAQ9GZX7 198 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 EHD3Q9NZN3 535 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 ENPP5Q9UJA9 477 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PSME2Q9UL46 239 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 SH3GLB1Q9Y371 365 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 FAM32AQ9Y421 112 aaKnown RBP12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PCDHGA6Q9Y5G7 932 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PCDHGA10Q9Y5H3 936 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 HEBP2Q9Y5Z4 205 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 NINQ8N4C6 2090 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 J3KTA2 159 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 HAT1O14929 419 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RGS10O43665 173 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PRICKLE3O43900 615 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PCDHGA12O60330 932 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ADAM23O75077 832 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 WBP4O75554 376 aaKnown RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RHCEP18577 417 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 HTR1BP28222 390 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 GGT2P36268 569 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 LIMS1P48059 325 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PPP2CBP62714 309 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PPP2CAP67775 309 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 MVKQ03426 396 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 KCNC4Q03721 635 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 TP53BP2Q13625 1128 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SMN1Q16637 294 aaKnown RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 NDUFAF5Q5TEU4 345 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF793Q6ZN11 406 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SLC16A12Q6ZSM3 486 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 AMER3Q8N944 861 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 IL17RCQ8NAC3 791 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 APH1BQ8WW43 257 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 FKBP10Q96AY3 582 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 OR2M4Q96R27 311 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RLIMQ9NVW2 624 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ZSCAN32Q9NX65 697 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 TAS2R7Q9NYW3 318 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SCML1Q9UN30 329 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RNF6Q9Y252 685 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 FANCMQ8IYD8 2048 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 LRP4O75096 1905 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 A0A1W2PQF6 199 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PRSS38A1L453 326 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 HMGN4O00479 90 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PPM1DO15297 605 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 SLC31A1O15431 190 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 B4GALT2O60909 372 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 GADD45GO95257 159 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 KLF8O95600 359 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 RECKO95980 971 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 BCL10O95999 233 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 MT-ND2P03891 347 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 TFPTP0C1Z6 253 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 PEBP1P30086 187 aaKnown RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 AHRP35869 848 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 CCT3P49368 545 aaKnown RBP12.38□□□□□ -0.43
GARNL3-220ENST00000496711 EMP3P54852 163 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 KIAA1024LP59773 190 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 CSNK2BP67870 215 aa12.38□□□□□ -0.43
GARNL3-220ENST00000496711 GANABQ14697 944 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms