RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CNIH2Q6PI25 160 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 IL27RAQ6UWB1 636 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SCIMPQ6UWF3 145 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PIM3Q86V86 326 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GLCCI1Q86VQ1 547 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PHACTR4Q8IZ21 702 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 NANOGP1Q8N7R0 232 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CDC26Q8NHZ8 85 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 METTL6Q8TCB7 284 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 OTULINQ96BN8 352 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 AARSD1Q9BTE6 412 aaKnown RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 SLC25A19Q9HC21 320 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ATP13A1Q9HD20 1204 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ISYNA1Q9NPH2 558 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CTSFQ9UBX1 484 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4Q9UBX2 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GSTK1Q9Y2Q3 226 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ASB1Q9Y576 335 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 OR6C65A6NJZ3 312 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM72CH0Y354 149 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 E2F3O00716 465 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CFDP00746 253 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 ADRB1P08588 477 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SULT1A3P0DMM9 295 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SULT1A4P0DMN0 295 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CRYBB1P53674 252 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 ACVR1Q04771 509 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GPR68Q15743 365 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 RFTN2Q52LD8 501 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM72AQ5TYM5 149 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 B3GNTL1Q67FW5 361 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM109BQ6ICB4 259 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM72DQ6L9T8 149 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.67□□□□□ -1.02
HPS4-217ENST00000496385 CHMP1BQ7LBR1 199 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM72BQ86X60 149 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 STPG2Q8N412 459 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 C7orf57Q8NEG2 295 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 FUBP1Q96AE4 644 aaKnown RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 C7orf34Q96L11 122 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 FEVQ99581 238 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SLC29A3Q9BZD2 475 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GPR63Q9BZJ6 419 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DLL4Q9NR61 685 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PIGVQ9NUD9 493 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 GALPQ9UBC7 116 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 HNRNPCL2B2RXH8 293 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CSO75390 466 aaKnown RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 UGT2B7P16662 529 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CPEP16870 476 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DEFB103AP81534 67 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PLIN5Q00G26 463 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 IL18Q14116 193 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 OPCMLQ14982 345 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 Q3ZCU0 254 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SPANXN4Q5MJ08 99 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 EEF1DP3Q658K8 133 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ZNF57Q68EA5 555 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 KIAA0907Q7Z7F0 614 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 NAXDQ8IW45 347 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 OR6P1Q8NGX9 317 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 KCTD13Q8WZ19 329 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SCRN2Q96FV2 425 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 HSH2DQ96JZ2 352 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 UBL7Q96S82 380 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 POLR2J2Q9GZM3 115 aaKnown RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 ACTR6Q9GZN1 396 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 IL23AQ9NPF7 189 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 TMPRSS4Q9NRS4 437 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 MLXQ9UH92 298 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PLCL2Q9UPR0 1127 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 PIN4Q9Y237 131 aaKnown RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 ANKRD36A6QL64 1941 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TMEM82A0PJX8 343 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 PDCD5O14737 125 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 GLP2RO95838 553 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 ITPKAP23677 461 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 POU1F1P28069 291 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 LCN1P31025 176 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 FGF9P31371 208 aaPredicted RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 ERVPABLB-1P60509 514 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 SNRPGP62308 76 aaKnown RBP8.66□□□□□ -1.02
HPS4-217ENST00000496385 CYP4F8P98187 520 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 PPIGQ13427 754 aaKnown RBP eCLIP8.66□□□□□ -1.021e-8■■■□□ 15.2
HPS4-217ENST00000496385 CDH18Q13634 790 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 GPR176Q14439 515 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TMEM240Q5SV17 173 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 FAM198BQ6UWH4 519 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 RAB11FIP2Q7L804 512 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 TMIEQ8NEW7 156 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 OR10G2Q8NGC3 310 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 OR6S1Q8NH40 331 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 NSMAFQ92636 917 aa8.66□□□□□ -1.02
HPS4-217ENST00000496385 MRPL45Q9BRJ2 306 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms