RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 TSFMP43897 325 aaKnown RBP16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 PMP22Q01453 160 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 SLC18A2Q05940 514 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 IFFO1Q0D2I5 559 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 STX4Q12846 297 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 TUBA3CQ13748 450 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 RASA2Q15283 850 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 NR6A1Q15406 480 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 MEP1AQ16819 746 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 TUBA3EQ6PEY2 450 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 SCIMPQ6UWF3 145 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 C16orf47Q6ZP98 133 aaPredicted RBP16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 DGAT2L6Q6ZPD8 337 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 GPRIN3Q6ZVF9 776 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 GPR180Q86V85 440 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 NUDT13Q86X67 352 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 SLC22A9Q8IVM8 553 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 CCDC63Q8NA47 563 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 B3GNT7Q8NFL0 401 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 HAS2Q92819 552 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 ZNF354BQ96LW1 612 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 DDX31Q9H8H2 851 aaKnown RBP16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 LIN28AQ9H9Z2 209 aaKnown RBP16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 TIMM22Q9Y584 194 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 COPG1Q9Y678 874 aaKnown RBP16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 SPACA6W5XKT8 324 aa16.39■□□□□ 0.21
RHBDD3-207ENST00000496342 MANBAO00462 879 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 UBFD1O14562 309 aaKnown RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 VPS4BO75351 444 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 SPAG7O75391 227 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 KLK1P06870 262 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 FAM58BPP0C7Q3 252 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 CREB1P16220 341 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TPP2P29144 1249 aaPredicted RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 CRHR1P34998 444 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 FOXA1P55317 472 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TAS2R50P59544 299 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 FOLH1Q04609 750 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 SRSF1Q07955 248 aaKnown RBP eCLIP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 RCN2Q14257 317 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 CYP20A1Q6UW02 462 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TRABD2AQ86V40 505 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 ATCAYQ86WG3 371 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 SRRM1Q8IYB3 904 aaKnown RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 MMP21Q8N119 569 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 SLC5A8Q8N695 610 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 GRHL3Q8TE85 626 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 PTPMT1Q8WUK0 201 aaPredicted RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 PPWD1Q96BP3 646 aaKnown RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TAAR6Q96RI8 345 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 SHCBP1LQ9BZQ2 653 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 RNF32Q9H0A6 362 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 RPF2Q9H7B2 306 aaKnown RBP16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TNFRSF12AQ9NP84 129 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TEKT2Q9UIF3 430 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 PHF11Q9UIL8 331 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 PPT2Q9UMR5 302 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 VPS4AQ9UN37 437 aa16.38■□□□□ 0.21
RHBDD3-207ENST00000496342 TRAV17A0A0B4J275 112 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 PROM1O43490 865 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 SEMA3DO95025 777 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 NR2F6P10588 404 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 HMOX2P30519 316 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 CD96P40200 585 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 GPR143P51810 404 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 GALNT1Q10472 559 aaPredicted RBP16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 LCP2Q13094 533 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 PCLAFQ15004 111 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 ELAVL1Q15717 326 aaKnown RBP16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 CCDC153Q494R4 210 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 COMMD6Q7Z4G1 85 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 RPS19BP1Q86WX3 136 aaKnown RBP16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 METTL4Q8N3J2 472 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 MDS2Q8NDY4 140 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 AGAP11Q8TF27 550 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 VMP1Q96GC9 406 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 APOPT1Q96IL0 206 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 DEFB126Q9BYW3 111 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 OR8D2Q9GZM6 311 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 MID1IP1Q9NPA3 183 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 KLHL1Q9NR64 748 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 LYARQ9NX58 379 aaKnown RBP16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 PSD3Q9NYI0 1048 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 SLC17A7Q9P2U7 560 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 LGALS13Q9UHV8 139 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 GRID1Q9ULK0 1009 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 SNX6Q9UNH7 406 aa16.37■□□□□ 0.21
RHBDD3-207ENST00000496342 UBR5O95071 2799 aaPredicted RBP16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 C17orf105B2RV13 164 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 HRKO00198 91 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 PGRMC2O15173 223 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 DDAH2O95865 285 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 TNNI3P19429 210 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 CCT5P48643 541 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 CLCN2P51788 898 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 NAGLUP54802 743 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 MLF1P58340 268 aa16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 IGLV3-21P80748 117 aaPredicted RBP16.36■□□□□ 0.21
RHBDD3-207ENST00000496342 HMGCS1Q01581 520 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms